Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g1416 ATGGGTTACCTCAGTAGAGCTTCGAAGAGGCTAAGGCAATCTAGGTACCTGTCCCTGTTATTTAATTCCTCCCCATTGTCGAATATTTATGGAGGCAAATCACTAAAGTTAGAAAGTACAATACTTTGTCGTCCCTCTGCTCTGAACCGTGCTTTGTTCTGTTCTCAAACTCGCCAAAACAGCAGAGAAAACAGTCCCATAGATTTGACTCAATACCCTCCAGAGCTTATAAGGAACTTCTCTATAATTGCACATATAGATCATGGCAAGTCTACTCTTGCCGATCGCCTTCTCGAGCTTACAGGGACTATTAAGAAGGGACATGGTCAGCCTCAATATCTTGACAAATTGCAGGTAGAAAGAGAAAGGGGTATCACAGTAAAAGCCCAGACAGCAACAATGTTCTATAAGCACACCATTCAGGAAGCTACATGTAGTGATGAGCAATGTCCAGCTAACTTTCTGCTTAATCTTATTGATACTCCCGGGCACGTAGACTTCAGTTATGAAGTGTCGAGGTCACTGGCAGCTTGTCAGGGTGCTCTTTTAGTTGTTGATGCTGCTCAAGGAGTGCAAGCTCAAACTGTTGCTAATTTTTATCTAGCTTTTGAATCCAACCTAACAATTATTCCTGTCATAAATAAAATAGACCAGCCAACTGCTGATCCTGATGGTGTTAAGGCGCAACTTAAGTCAATGTTTGATCTTGACCCGAGTGACGCACTTTTAACATCTGCTAAAACAGGACAGGGTCTTGAGCAAGTCCTTCCTGCTGTCATAGAGCGCATACCTCCACCTCCTGGGAAGAGTGATTCTCCCCTACGCGTGCTTTTGCTTGATTCTTATTATGATGAATACAAAGGGGTAATATGCCATGTTGCAGTTGTTGATGGTGCCCTGCGCAAGGGGGATAAAATTTCATCTGCTGCAACTGGACAGGTTTATGAAGCTTTGGATGTAGGCATCATGCATCCTGAACTTAAATCTACTGGCATGCTGCTCACTGGACAAGTTGGTTATGTTGTTAGTGGCATGCGTTCAACCAAGGAGGCACGTGTTGGGGATACACTTTTCCATACTCGAAGCACTATAGAGCCTCTTCCAGGCTTTAAGCCAGCAAAACATATGGTATTCTCCGGTCTTTATCCAGCGGATGGATCTGATTTTGAAGCCCTCAATCATGCAATAGAGAGACTGACATGTAACGATGCTAGTGTCTCTATCACCAAAGAAACTAGTACCGCCCTAGGTTTGGGATTCAGGTCTAGCTTGCTACACATGGATGTCTTTCATCAGAGGCTCGAACAGGAGTATGGAGCTCATGTTATCTCAACTGTTCCAACTGTACCGTATATATTTGAGTATTCTGATGGAAGCAAATTGCAAGTTGAGAACCCTGCTGCATTACCCTCTAATCCCAAGCAACGAGTGACAGCCTGTTGGGAACCAACAGTGATAGCAACAATTATCATTCCCAGTGAGTATGTGGGGTCTGTTATTACCCTTTGCTCTGAGAGAAGAGGTCAGCAATTGGAGTACTCATTCATTGACAGTCAAAGGGCATTCATGAAGTATCGCTTGCCTTTGAGGGAAATTGTTGTCGACTTTTACAATGAATTAAAGAGTTTAACATCAGGCTATGCTTCATTCGATTATGAGGATGCAGATTATCAGGAGGCCGATCTGGTGAAACTTGATATTCTCTTAAATGGACAACCAGTTGATGCAATGGCAACCATTGTTCATAAGTTGAAAGCATATCGAGTAGGGCGTGAACTGGTGGATAAATTGAAGAAAGTTATAGACAGGCAAATGTTTGAGATATCCTTACAAGCTGCTATTGGGTCAAAAGTGATAGCTAGGGAGACGATTTCAGCAATGAGAAAAAATGTCCTTGCCAAGTGTTATGGTGGTGATGTTACTCGGAAGAGGAAGTTGTTGGAGAAGCAGAAAGAAGGAAAGAAGAGAATGAAACGAGTTGGTTCTGTTGATATACCACAAGAGGCATTCCATGAATTATTGAAAGTTTCATAA 2034 0.4267 MGYLSRASKRLRQSRYLSLLFNSSPLSNIYGGKSLKLESTILCRPSALNRALFCSQTRQNSRENSPIDLTQYPPELIRNFSIIAHIDHGKSTLADRLLELTGTIKKGHGQPQYLDKLQVERERGITVKAQTATMFYKHTIQEATCSDEQCPANFLLNLIDTPGHVDFSYEVSRSLAACQGALLVVDAAQGVQAQTVANFYLAFESNLTIIPVINKIDQPTADPDGVKAQLKSMFDLDPSDALLTSAKTGQGLEQVLPAVIERIPPPPGKSDSPLRVLLLDSYYDEYKGVICHVAVVDGALRKGDKISSAATGQVYEALDVGIMHPELKSTGMLLTGQVGYVVSGMRSTKEARVGDTLFHTRSTIEPLPGFKPAKHMVFSGLYPADGSDFEALNHAIERLTCNDASVSITKETSTALGLGFRSSLLHMDVFHQRLEQEYGAHVISTVPTVPYIFEYSDGSKLQVENPAALPSNPKQRVTACWEPTVIATIIIPSEYVGSVITLCSERRGQQLEYSFIDSQRAFMKYRLPLREIVVDFYNELKSLTSGYASFDYEDADYQEADLVKLDILLNGQPVDAMATIVHKLKAYRVGRELVDKLKKVIDRQMFEISLQAAIGSKVIARETISAMRKNVLAKCYGGDVTRKRKLLEKQKEGKKRMKRVGSVDIPQEAFHELLKVS 677
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g1416 677 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 74 288 IPR027417 -
Mibi06g1416 677 FunFam Translation factor GUF1, mitochondrial 447 559 - -
Mibi06g1416 677 CDD lepA_C 482 561 IPR035654 -
Mibi06g1416 677 SUPERFAMILY EF-G C-terminal domain-like 481 575 IPR035647 -
Mibi06g1416 677 Gene3D - 75 268 IPR027417 -
Mibi06g1416 677 FunFam Elongation factor 4 74 268 - -
Mibi06g1416 677 Pfam Elongation factor G C-terminus 482 567 IPR000640 -
Mibi06g1416 677 CDD LepA 78 266 - -
Mibi06g1416 677 Gene3D Elongation Factor G (Translational Gtpase), domain 3 368 446 - -
Mibi06g1416 677 Hamap Elongation factor 4 [lepA]. 70 677 IPR006297 GO:0005525
Mibi06g1416 677 Gene3D - 447 560 - -
Mibi06g1416 677 CDD EF4_II 274 359 - -
Mibi06g1416 677 TIGRFAM small_GTP: small GTP-binding protein domain 80 255 IPR005225 GO:0005525
Mibi06g1416 677 PANTHER TRANSLATION FACTOR GUF1-RELATED 50 676 IPR006297 GO:0005525
Mibi06g1416 677 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 75 267 IPR000795 GO:0003924|GO:0005525
Mibi06g1416 677 Gene3D Translation factors 269 367 - -
Mibi06g1416 677 SUPERFAMILY EF-G C-terminal domain-like 376 450 IPR035647 -
Mibi06g1416 677 FunFam Translation factor GUF1, mitochondrial 269 367 - -
Mibi06g1416 677 Pfam GTP-binding protein LepA C-terminus 569 675 IPR013842 -
Mibi06g1416 677 FunFam Translation factor GUF1, mitochondrial 561 635 - -
Mibi06g1416 677 Gene3D - 561 635 IPR038363 -
Mibi06g1416 677 PRINTS GTP-binding elongation factor signature 122 130 IPR000795 GO:0003924|GO:0005525
Mibi06g1416 677 PRINTS GTP-binding elongation factor signature 209 218 IPR000795 GO:0003924|GO:0005525
Mibi06g1416 677 PRINTS GTP-binding elongation factor signature 157 167 IPR000795 GO:0003924|GO:0005525
Mibi06g1416 677 PRINTS GTP-binding elongation factor signature 173 184 IPR000795 GO:0003924|GO:0005525
Mibi06g1416 677 PRINTS GTP-binding elongation factor signature 79 92 IPR000795 GO:0003924|GO:0005525
Mibi06g1416 677 Pfam Elongation factor Tu GTP binding domain 77 264 IPR000795 GO:0003924|GO:0005525
Mibi06g1416 677 FunFam Translation factor GUF1, mitochondrial 368 446 - -
Mibi06g1416 677 TIGRFAM lepA: elongation factor 4 76 676 IPR006297 GO:0005525
Mibi06g1416 677 SUPERFAMILY Translation proteins 265 362 IPR009000 -
Mibi06g1416 677 ProSitePatterns Translational (tr)-type guanine nucleotide-binding (G) domain signature. 115 130 IPR031157 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g1416 Mibi-ChrMibi06 34540567 34544590 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi06g1416 77 218 Eukaryotic Initiation Factors Gene Family AT1G56070 40.972 2.04e-23 103