Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g1400 ATGGGTTTTGTCGCCTCCCATAAAAAGGAAAAGCAAACCCTAGATTCAGAGTTTGGAGGAGGAAGACGAAGACTGAGGAAAATGGTGCAGAGGCTCACGTACAGGAAGCGCCACAGTTATGCCACCAAATCCAACCAGCACAGGGTTGTCAAAACCCCTGGTGGCAAGTTGGTTTATCAAACCACAAAGAAGAGAGCAAGCGGTCCTAAGTGTCCTGTTACTGGAAAGAGGATCCAAGGGATTCCACATTTGAGACCTGCTGAATACAAGAGGTCCAGATTGCCTAGGAACCGTAGAACAGTTAACAGGGCCTATGGAGGTGTTTTGTCTGGAGGAGCTGTCAGAGAAAGGATAATCCGAGCTTTTCTCGTGGAGGAGCAAAAGATTGTGAAGAAGGTATTGAAGATCCAAAAGACGAGAGAAAAGCAAGCATCGAGGAGCTAA 444 0.4707 MGFVASHKKEKQTLDSEFGGGRRRLRKMVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLPRNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQKIVKKVLKIQKTREKQASRS 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g1400 147 Gene3D - 66 147 - -
Mibi06g1400 147 Pfam Ribosomal protein L34e 28 123 IPR008195 GO:0003735|GO:0005840|GO:0006412
Mibi06g1400 147 MobiDBLite consensus disorder prediction 8 22 - -
Mibi06g1400 147 MobiDBLite consensus disorder prediction 1 22 - -
Mibi06g1400 147 ProSitePatterns Ribosomal protein L34e signature. 42 55 IPR018065 -
Mibi06g1400 147 Gene3D - 28 64 - -
Mibi06g1400 147 PRINTS Ribosomal protein L34 signature 71 81 IPR008195 GO:0003735|GO:0005840|GO:0006412
Mibi06g1400 147 PRINTS Ribosomal protein L34 signature 40 53 IPR008195 GO:0003735|GO:0005840|GO:0006412
Mibi06g1400 147 PRINTS Ribosomal protein L34 signature 93 115 IPR008195 GO:0003735|GO:0005840|GO:0006412
Mibi06g1400 147 PRINTS Ribosomal protein L34 signature 53 70 IPR008195 GO:0003735|GO:0005840|GO:0006412
Mibi06g1400 147 PANTHER 60S RIBOSOMAL PROTEIN L34 28 143 IPR008195 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g1400 Mibi-ChrMibi06 34383640 34385663 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi06g1400 28 144 Cytoplasmic Ribosomal Protein Gene Family AT1G69620 90.598 6.45e-74 214