Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g1398 ATGGGAAGGCCTCCTTGTTGTGACAAAGGAGTCAAGAAAGGACCTTGGACTCCTGAGGAAGATATCTTATTGGTCTCATATATACAGCAACATGGCCCTGGAAATTGGAAGGCTGTTCCTACCAATACCGGGTTGTCTCGGTGCAGCAAGAGTTGCAGACTTAGGTGGACTAATTACCTGAGGCCAGGAATCAAGCGTGGCAATTTCACTGACCAAGAAGAGAAGATGATCATCCATCTCCAAGCCCTTCTAGGCAATAGATGGGCTGCGATAGCTTCCTACCTTCCTCAGAGAACAGACAACGACATAAAAAATTATTGGAACACCCACTTGAAGAAGAAGCTGAAGAAAATGCAGATGGGTGTGGAAGGAGAGAGCACGAGAGATGGGTTTTCTGCTTCCCACACTACAATCATGCCTAGAGGCCAATGGGAAAGAAGGCTCCAAACTGATATCCAAATGGCTAAAAGTGCTCTTCGCGATGCACTCTCTCCTCGTGATACTAATACATCCTCATCCTCTTCCACTTGTGTCAAACCAGCACAATCTTTGTGCTATGCTTCCACTGCTGACAACATAGCTCGTTTGCTCAAGGAATGGAAGAAGAATCCACCAAAGAAGAATCCCTCTCGCACCAACTCAAATGTGACTCAGAACTCACTTGGAAATTTGGATTCTTGTGGTGGCAAGGAATTAGACCAAAACAAGGGAAACTGCAGCATTGAAACATGTGAGATGACGTTTGAGTCATTGTTTGGGTTGGAGTCTTTGGATTCTTCCAATTCTGAGTTTTCTCAATCTCTGTCTCCTGATGACCCTGAGCCTACCACTACTACAACAACTTTTTTGCAAGATGAAAGCAAGCCGGAGTATAATGCAGATTTGCCACTTTCTATTCTTGAGAAATGGCTCTTAGATGAAGCTTCCTTTCCATTGTAA 939 0.4452 MGRPPCCDKGVKKGPWTPEEDILLVSYIQQHGPGNWKAVPTNTGLSRCSKSCRLRWTNYLRPGIKRGNFTDQEEKMIIHLQALLGNRWAAIASYLPQRTDNDIKNYWNTHLKKKLKKMQMGVEGESTRDGFSASHTTIMPRGQWERRLQTDIQMAKSALRDALSPRDTNTSSSSSTCVKPAQSLCYASTADNIARLLKEWKKNPPKKNPSRTNSNVTQNSLGNLDSCGGKELDQNKGNCSIETCEMTFESLFGLESLDSSNSEFSQSLSPDDPEPTTTTTTFLQDESKPEYNADLPLSILEKWLLDEASFPL 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g1398 312 MobiDBLite consensus disorder prediction 200 228 - -
Mibi06g1398 312 MobiDBLite consensus disorder prediction 261 287 - -
Mibi06g1398 312 Pfam Myb-like DNA-binding domain 66 111 IPR001005 -
Mibi06g1398 312 Pfam Myb-like DNA-binding domain 13 60 IPR001005 -
Mibi06g1398 312 Gene3D - 68 130 - -
Mibi06g1398 312 CDD SANT 15 60 IPR001005 -
Mibi06g1398 312 Gene3D - 12 65 - -
Mibi06g1398 312 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 65 115 IPR017930 -
Mibi06g1398 312 SUPERFAMILY Homeodomain-like 10 107 IPR009057 -
Mibi06g1398 312 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 8 64 IPR017930 -
Mibi06g1398 312 MobiDBLite consensus disorder prediction 261 290 - -
Mibi06g1398 312 FunFam Transcription factor MYB30 67 125 - -
Mibi06g1398 312 MobiDBLite consensus disorder prediction 207 225 - -
Mibi06g1398 312 SMART sant 65 113 IPR001005 -
Mibi06g1398 312 SMART sant 12 62 IPR001005 -
Mibi06g1398 312 ProSiteProfiles Myb-like domain profile. 8 60 IPR001005 -
Mibi06g1398 312 CDD SANT 68 110 IPR001005 -
Mibi06g1398 312 FunFam MYB-related transcription factor 12 65 - -
Mibi06g1398 312 ProSiteProfiles Myb-like domain profile. 61 111 IPR001005 -
Mibi06g1398 312 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 243 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g1398 Mibi-ChrMibi06 34368207 34369341 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi06g1398 1 312 MYB Transcription Factor Family AT5G62470 47.297 3.45e-99 294
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mibi06g1398 Myb_DNA-binding 4.2e-16 CL0123