Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g1397 ATGTGCATATGCATTTCAAAGTATAAGCTGTATCTCATCATAATATTTGCAGGGAGGGCTAATTGTAACAGAGATATGAGGAAACGTCAAGTAGTGTTGAGAAGGGAGGAGCCAGTTGGGGAACCAAACTCTTCATCTTTTACAGTTAGGAGTGTGAAATATGGAGAGTGTCAAAAGAATCACGCGGCTAACGTCGGAGGGTACGCCGTGGACGGTTGCCGGGAGTTCATGGCTAGCGGAGATGAGGGCACAACCGCCGCCCTGACCTGCGCCGCCTGTGGTTGTCACCGGAATTTTCACAAAAGAGAGGTGGAGACAGAAGTAGTGTGTGAGTGCTCTTCACCTCCCTCCAACGGGACTTGA 363 0.4959 MCICISKYKLYLIIIFAGRANCNRDMRKRQVVLRREEPVGEPNSSSFTVRSVKYGECQKNHAANVGGYAVDGCREFMASGDEGTTAALTCAACGCHRNFHKREVETEVVCECSSPPSNGT 120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g1397 120 Pfam ZF-HD protein dimerisation region 52 104 IPR006456 -
Mibi06g1397 120 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 28 107 - -
Mibi06g1397 120 TIGRFAM ZF_HD_prot_N: ZF-HD homeobox protein Cys/His-rich dimerization domain 53 104 IPR006456 -
Mibi06g1397 120 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 54 103 IPR006456 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g1397 Mibi-ChrMibi06 34354770 34355219 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi06g1397 26 119 Zinc finger-homeobox gene family AT3G28917 74.747 2.81e-45 140
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Mibi06g1397 ZF-HD_dimer 4e-30 No_clan