Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g1396 ATGGACTTAACCCCCAACACCACCAATACTACCAAATCCCCAGACCATGACACCGAAACTCCCACCAGGATCCCAACCACCGCCGCCAAACCCTTATCCTTCTCCAACGGCATCCTTAAACGCCACAACCATAACCACCATAACCGCCTCCACAACCACCACCCTCTCCCTGTAACATACAAAGAATGCCTCAAAAACCACGCCGCCACCTTAGGTGGCCACGCCCTTGACGGCTGTGGCGAATTCATGGCCTCCCCCGCCGCCAATTCCGCCGACCCCACCTCCATCAAATGCGCCGCCTGCGGCTGCCACCGCAATTTCCACCGCCGCGAGCCCGACGAGCCAATCACAACCACCCACGTCATCGAATACCAATCCCACCACCGCCACCACCCTCCGCCGCCGCCGCCGATACCGTTCCCCGTCCCTAACCGGAGCCCGAATTCGGCTTCGCCTCCCCCGATCTCCTCCTCGTATTACCCGTCGGCGCCGCACATGCTGCTGGCCTTGTCGGCGGCCGGAATTCAGGCGCCGCCGGAGAGCGCGGCGGCTCCGGCGGGTGTTTTGGTTTCGCCGGGCTCGAACGCTAGGAAGCGGTTCAGGACTAAGTTTACGCAGGAACAGAAGGAGAGGATGTACCATTTTGCTGAGAGGGTTGAGTGGAAGATGCAGAAGAGTGATGAGGATTTGGTGAGAGAGTTCTGTAATGAAGTTGGGGTTGATAGGAGTGTGTTGAAGGTTTGGATGCACAACAACAAGAACACTTTTGGTAAGAGGGATTCTGCTAATAACAATAATGATGATGATAATGATAATAACAACAACGACGACGATGGTAGGAACAATTTAGTGGAAGACCCTCATGCTCTTGTCGGAGAAATTCATGTTAACAACGACAATAACGGCGGCTCGCAGGATCAGAATAATCATCTGTATAACAACGATAATTGTGGGGCTAATCTTGGTGCTAATGGGTCGTCTTCTTCTTCTTGA 993 0.5428 MDLTPNTTNTTKSPDHDTETPTRIPTTAAKPLSFSNGILKRHNHNHHNRLHNHHPLPVTYKECLKNHAATLGGHALDGCGEFMASPAANSADPTSIKCAACGCHRNFHRREPDEPITTTHVIEYQSHHRHHPPPPPPIPFPVPNRSPNSASPPPISSSYYPSAPHMLLALSAAGIQAPPESAAAPAGVLVSPGSNARKRFRTKFTQEQKERMYHFAERVEWKMQKSDEDLVREFCNEVGVDRSVLKVWMHNNKNTFGKRDSANNNNDDDNDNNNNDDDGRNNLVEDPHALVGEIHVNNDNNGGSQDQNNHLYNNDNCGANLGANGSSSSS 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g1396 330 Gene3D - 190 257 - -
Mibi06g1396 330 MobiDBLite consensus disorder prediction 297 330 - -
Mibi06g1396 330 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 45 255 - -
Mibi06g1396 330 MobiDBLite consensus disorder prediction 1 30 - -
Mibi06g1396 330 MobiDBLite consensus disorder prediction 254 330 - -
Mibi06g1396 330 MobiDBLite consensus disorder prediction 124 155 - -
Mibi06g1396 330 MobiDBLite consensus disorder prediction 131 150 - -
Mibi06g1396 330 TIGRFAM ZF_HD_prot_N: ZF-HD homeobox protein Cys/His-rich dimerization domain 59 111 IPR006456 -
Mibi06g1396 330 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 60 111 IPR006456 -
Mibi06g1396 330 TIGRFAM homeo_ZF_HD: homeobox domain, ZF-HD class 197 254 IPR006455 -
Mibi06g1396 330 Pfam ZF-HD protein dimerisation region 58 112 IPR006456 -
Mibi06g1396 330 FunFam Zinc-finger homeodomain protein 2 187 258 - -
Mibi06g1396 330 SUPERFAMILY Homeodomain-like 191 258 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g1396 Mibi-ChrMibi06 34334888 34335880 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi06g1396 1 286 ZF-HD Transcription Factor Family AT3G28920 52.805 8.87e-74 228
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Mibi06g1396 ZF-HD_dimer 5.8e-28 No_clan