Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g1393 ATGCAGACGACAAGTAAAAATATGTGGAGCTCCAATCCTGAAAGAGATCAGCCAGACATCCCAAGACCCCATAAACGACCTTTTCTTCTCCTTCCCTTTGCAAAACTTGCAAAGAATTATCCTCCTGGTTTCCTTCGAAAGGTACTGGCAGAGATTATAGGAACGTATCTGTTGGTGTTTGTGGGAAGTGGGTCGGCTGCGATTAATGCATTTGATGAGCAGAAAATATCAAAACTAGGAGCTTCACTTGCAGGAGGATTCATTGTGATTGTAATGATCTATGCTATAGGGCACATCTCTGGTGCTCACATGAACCCAGCTGTGTCCTTAGCTTTTGCTGCTGTGAGGCACTTTCCATGGAAACAGGTCCCGTTATATGTGGCAGCACAATTGACAGGAGCAGTTTCTGCCTCTTTTACATTGCGGCTGATACTGGACCCAATAAAACAGCTTGGGACAACCTCACCTTCTGGAAGTGATGTTCAAGCTCTCTCCATGGAGATCGTGGCAACGTTCACTATGATGTTCATCGCCTCCGCTGTCTCTACTGATGCAAAAGCTATTGGAGAGCTCGCCGGAGTTGCAGTAGGCTCTTCAGTAATCATAGCAGGCATCCTTGCAGGACCTATATCTGGGGGATCAATGAACCCAGCAAGAACACTTGGCCCTGCAATAGCAAGTGGATCCTATAAAGGAATTTGGGTTTATCTGGTTGGACCAGTTACTGGGGCACTTTTGGGAGCATGGTCTTATGCTACTATTAAAGAGACAGATGAGTCAGCTTCTGCCACTTCACTCCTATCATTTCCTTTTGAGCTACGCTCAAAGGATAGAGAAACTGGACAAGTTAAAAACAAAGACAACCCACAAATTATGAGTGAAAACAATGTTTAG 894 0.4497 MQTTSKNMWSSNPERDQPDIPRPHKRPFLLLPFAKLAKNYPPGFLRKVLAEIIGTYLLVFVGSGSAAINAFDEQKISKLGASLAGGFIVIVMIYAIGHISGAHMNPAVSLAFAAVRHFPWKQVPLYVAAQLTGAVSASFTLRLILDPIKQLGTTSPSGSDVQALSMEIVATFTMMFIASAVSTDAKAIGELAGVAVGSSVIIAGILAGPISGGSMNPARTLGPAIASGSYKGIWVYLVGPVTGALLGAWSYATIKETDESASATSLLSFPFELRSKDRETGQVKNKDNPQIMSENNV 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g1393 297 MobiDBLite consensus disorder prediction 278 297 - -
Mibi06g1393 297 SUPERFAMILY Aquaporin-like 41 258 IPR023271 -
Mibi06g1393 297 Pfam Major intrinsic protein 44 251 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mibi06g1393 297 ProSitePatterns MIP family signature. 103 111 IPR022357 -
Mibi06g1393 297 PRINTS Major intrinsic protein family signature 234 254 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mibi06g1393 297 PRINTS Major intrinsic protein family signature 166 184 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mibi06g1393 297 PRINTS Major intrinsic protein family signature 197 219 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mibi06g1393 297 PRINTS Major intrinsic protein family signature 46 65 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mibi06g1393 297 PRINTS Major intrinsic protein family signature 122 141 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mibi06g1393 297 PRINTS Major intrinsic protein family signature 85 109 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mibi06g1393 297 CDD MIP 46 251 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mibi06g1393 297 PANTHER AQUAPORIN NIP2-1 25 259 IPR034294 -
Mibi06g1393 297 MobiDBLite consensus disorder prediction 1 23 - -
Mibi06g1393 297 Gene3D Glycerol uptake facilitator protein. 32 264 IPR023271 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g1393 Mibi-ChrMibi06 34285510 34288098 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi06g1393 46 259 Major Intrinsic Protein MIP AT5G37820 52.778 2.03e-74 229