Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g1392 ATGCAGAGGACAAGTCAACACCCTGCTGCCCAGAATCAAAATTCTGGTCTCTCCATGGCAAAACTTGCAGAGAATTACCCTCCGGGTTTTCCTAGGAAGGTATTGGCGGAGGTAATAGGAACATATCTGCTGGTGTTTGTGGCAAGTGGGACGGCTGCACTAAATGGGTTTGACGAGAAGAAAGTGTCACAACTTGGAGCTGAACTTGCAGCCGGATTCATTGTCATGGTCATGGTCTACGCCATCGGACATATCTCCGGTGCCCATATAAACCCGGCAGTCTCCGTAGCTTTTGCCGCTTCCGGCCATTTCCCATGGAAACAGGTCCCATTTTACGTGGGAGCTCAAATGATAGGAGGCCTTGCTGCCTCTTTTACTCTGAGACTATTACTGCATCCAATAAAAATGCTGGGAACAAACTCTCCTTCTGGATCAGATGCTCAAGCCCTTGTCATGGAGATCCTCATAACTTTCATTCTCATGTTCGTTATCTGTGCCGTCACTACTGACTCCAAAGCTGTTGGAGACCTGGCAGGAGTTGCAATAGGCTTTTCAGTGGGCATAGGAAACATCATTGGAGGACCAATATCAGGGGGGTCGTTGAATCCAGCAAGAACATTGGGTCCAGCAATAGCAAGTGGGTCCTATAAAGGAATATGGGTCTATCTGGTTGGACCAACTGTTGGGGCCGTTTTAGGGGCATGGTCTTACAGTACCATTCAGGAGAATGAGAATAACTCGCTTCTGTCCAAGCTTCGCTCCACAAATAAGGAAGCTAATCAAGTTGACGTGGAAGATGATCCACACGTGCGCCCCAACAGAGTGTAA 828 0.4819 MQRTSQHPAAQNQNSGLSMAKLAENYPPGFPRKVLAEVIGTYLLVFVASGTAALNGFDEKKVSQLGAELAAGFIVMVMVYAIGHISGAHINPAVSVAFAASGHFPWKQVPFYVGAQMIGGLAASFTLRLLLHPIKMLGTNSPSGSDAQALVMEILITFILMFVICAVTTDSKAVGDLAGVAIGFSVGIGNIIGGPISGGSLNPARTLGPAIASGSYKGIWVYLVGPTVGAVLGAWSYSTIQENENNSLLSKLRSTNKEANQVDVEDDPHVRPNRV 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g1392 275 Pfam Major intrinsic protein 30 237 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mibi06g1392 275 SUPERFAMILY Aquaporin-like 26 246 IPR023271 -
Mibi06g1392 275 PRINTS Major intrinsic protein family signature 183 205 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mibi06g1392 275 PRINTS Major intrinsic protein family signature 220 240 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mibi06g1392 275 PRINTS Major intrinsic protein family signature 71 95 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mibi06g1392 275 PRINTS Major intrinsic protein family signature 108 127 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mibi06g1392 275 PRINTS Major intrinsic protein family signature 152 170 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mibi06g1392 275 PRINTS Major intrinsic protein family signature 32 51 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mibi06g1392 275 TIGRFAM MIP: MIP family channel proteins 36 237 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mibi06g1392 275 CDD MIP 32 237 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mibi06g1392 275 ProSitePatterns MIP family signature. 89 97 IPR022357 -
Mibi06g1392 275 PANTHER AQUAPORIN NIP2-1 14 245 IPR034294 -
Mibi06g1392 275 Gene3D Glycerol uptake facilitator protein. 1 251 IPR023271 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g1392 Mibi-ChrMibi06 34282952 34284551 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi06g1392 10 260 Major Intrinsic Protein MIP AT5G37820 45.455 4.17e-71 220