Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g1370 ATGGCAGCTCGTGTAATCACGGTTTCACAGTCCGGAAACGGAGACTATCGGACGGTGCAGGAAGCAATTGATGCCATTCCACTGGGAAACAATCGTCGTACGGTGATTCGTGTGTCTCCGGGAATCTACAAGCAGCCAGTGTACGTACCCAAGACTAAGAATTTCATAACCCTTGCTGGTATGTGCCCAGAGGATACTGTGCTTACGTGGAATAATACTGCCACCAGAATCGAACACCATCAGGCTGCTCGAGTAATAGGCACTGGTACTTTTGGCTGTGGAAGTACCATTGTGGAAGGAGAGGATTTTATTGCCGAGAACATCACGTTCGAGAATTCATCCCCTCAGGGTTCAGGTCAAGCAGTGGCAATTAGAGTGACAGCAGATCGATGTGCCTTTTATAACTGCAGGTTCCTAGGATGGCAGGACACTCTGTACTTACACTATGGCAAACAGTACTTGAAAGATTGTTATATTGAAGGAAGTGTGGACTTTATTTTTGGCAATAGCACTGCTCTTTTGGAACATTGCCATATTCACTGCAAGGCTGAAGGCTTCATAACTGCACAGAGCAGAAAATCTTCTCATGAAACGACCGGTTATGTGTTCCTAAGATGTGTCATAACGGGTAATGGAGATAATTCATACGCATATCTTGGACGACCATGGGGACCTTTTGGAAGAGTGATCTTTGCTTACACTTATATGGATCGATGTATAAGGCCTCACGGCTGGAATAATTGGGGTAAAATTGAGAATGAGAGAACTGCTTGCTTCTATGAATTCAGGTGTCATGGCCACGGTTGCTGTCCATCCAAACGAGTAGCATGGGCTAGAGAATTGATAGATGAAGAAGCAGAACAGTTCCTTTCACATAGTTTCATTGACCCAGATGCTAATAGACCTTGGCTTGCCCAGAGAATGGCTGTGAAGATTCCATATTCTGCTTAG 951 0.4501 MAARVITVSQSGNGDYRTVQEAIDAIPLGNNRRTVIRVSPGIYKQPVYVPKTKNFITLAGMCPEDTVLTWNNTATRIEHHQAARVIGTGTFGCGSTIVEGEDFIAENITFENSSPQGSGQAVAIRVTADRCAFYNCRFLGWQDTLYLHYGKQYLKDCYIEGSVDFIFGNSTALLEHCHIHCKAEGFITAQSRKSSHETTGYVFLRCVITGNGDNSYAYLGRPWGPFGRVIFAYTYMDRCIRPHGWNNWGKIENERTACFYEFRCHGHGCCPSKRVAWARELIDEEAEQFLSHSFIDPDANRPWLAQRMAVKIPYSA 316
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g1370 316 Pfam Pectinesterase 6 296 IPR000070 GO:0030599|GO:0042545
Mibi06g1370 316 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 3 303 - -
Mibi06g1370 316 SUPERFAMILY Pectin lyase-like 2 303 IPR011050 -
Mibi06g1370 316 ProSitePatterns Pectinesterase signature 2. 159 168 IPR033131 -
Mibi06g1370 316 FunFam Pectinesterase 2 309 - -
Mibi06g1370 316 Gene3D - 1 311 IPR012334 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Mibi06g1370 Mibi-ChrMibi06 33991890 33996947 Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi06g1370 4 309 Carbohydrate Esterase AT5G47500 38.924 1.42e-70 221