Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g1367 ATGGGAAGGAGAAGGAAAGCAATGGAAACAGAGGAAGACAGAACCATGAAATGGGATGAGATGATGAAGGAAGCTGAAGCATTGGGAGTGAGCAGAAGAGCTAGGAAGCGTTTTGTTGGGGTGAGACAAAGGCCTTCAGGAAGATGGGTTGCAGAGATTAAGGATACCATTCAGAAGATTAGAGTTTGGTTGGGAACTTTCGATACTGCGGAGGAAGCAGCTCGAGCTTACGATGAAGCTGCTTGTCTCCTTCGTGGTGCTAATACTAGGACCAATTTCTGGCCCCCTTCTTATTCTTCTTCATCCACTGTTCTTTCTTCTAAGATCACCAATCTCCTCCTTCAAAGGCTCAAAGCCAGAAACAACTCTTGCTCTGATTCTTCTTCTTCTTCTTCCTCTTCCTCCTCCTTTATTTCTCTTCCTTCTTATCAGCAAGTTGATTTGCAAGATGAAGAAGAAGCTGAGGATTTTTCTATTGACCAGTTGGCTGATTTCCTTCACTATCCTGAAGATCAAAGCGAAGGGAACAATGACTTTAGTATGTTCACTGATCATAGTGCAAAAATTGAATCCTTTACCACTAGTCTTGAATCATGTTTGACTCAAACGGAGGATTGCAGAGAAAGAGAAATGGGGTTTGAGAACGACGCCAGCAATGTTACAGACTGCAACTCAGGAGGGGGAAGAGAGGAAGAAAGTGAAGAAGAAGACGATATCATGCATGTGGGTGTGGATGATTTTGAGTTTGTGGACAAAGTTGATCCATCATGTTACTATTACTCACCTTTTGAGATGGCGGAAGATATGGAGGAGACACCTGTGGTGGTGGAAGCAGAGAGTGACGGTGATGAGCCTTCTATGCTCAGAGCTGCCATGAAGAGGATGAAGTATGAGAGGAAGTTCTCAGCTTCTCTTTATGCATTCAATGGAATATCAGAATGCTTGAAGCTGAAGCTAGGAGGATCAGGAAACTCAAAGGGAAGAGGAGTTTCTGATCATTTAGCTAACCTTAAGATGGCATGTAACAGCAAGGAGAAATTGGAGGAGAATAAGGAGCATAAAGAAGAAAAAGAAAACACAGTGACATTAAATGAGGCAGAGTGTTCTTCATCTTCTTCCAGTGTTGATGGTGAATTGTTGCTTTGGAATTCTCTGGATCTTCCTACCATATGTTACGTTAATTAA 1185 0.4253 MGRRRKAMETEEDRTMKWDEMMKEAEALGVSRRARKRFVGVRQRPSGRWVAEIKDTIQKIRVWLGTFDTAEEAARAYDEAACLLRGANTRTNFWPPSYSSSSTVLSSKITNLLLQRLKARNNSCSDSSSSSSSSSSFISLPSYQQVDLQDEEEAEDFSIDQLADFLHYPEDQSEGNNDFSMFTDHSAKIESFTTSLESCLTQTEDCREREMGFENDASNVTDCNSGGGREEESEEEDDIMHVGVDDFEFVDKVDPSCYYYSPFEMAEDMEETPVVVEAESDGDEPSMLRAAMKRMKYERKFSASLYAFNGISECLKLKLGGSGNSKGRGVSDHLANLKMACNSKEKLEENKEHKEEKENTVTLNEAECSSSSSSVDGELLLWNSLDLPTICYVN 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g1367 394 MobiDBLite consensus disorder prediction 217 238 - -
Mibi06g1367 394 FunFam ethylene-responsive transcription factor RAP2-11 36 95 - -
Mibi06g1367 394 CDD AP2 36 93 IPR001471 GO:0003700|GO:0006355
Mibi06g1367 394 Pfam AP2 domain 37 86 IPR001471 GO:0003700|GO:0006355
Mibi06g1367 394 ProSiteProfiles AP2/ERF domain profile. 37 94 IPR001471 GO:0003700|GO:0006355
Mibi06g1367 394 SMART rav1_2 37 100 IPR001471 GO:0003700|GO:0006355
Mibi06g1367 394 MobiDBLite consensus disorder prediction 347 371 - -
Mibi06g1367 394 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 14 304 - -
Mibi06g1367 394 Gene3D AP2/ERF domain 36 94 IPR036955 GO:0003700|GO:0006355
Mibi06g1367 394 SUPERFAMILY DNA-binding domain 37 94 IPR016177 GO:0003677
Mibi06g1367 394 Coils Coil 337 364 - -
Mibi06g1367 394 MobiDBLite consensus disorder prediction 347 362 - -
Mibi06g1367 394 PRINTS Ethylene responsive element binding protein signature 60 76 IPR001471 GO:0003700|GO:0006355
Mibi06g1367 394 PRINTS Ethylene responsive element binding protein signature 38 49 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g1367 Mibi-ChrMibi06 33971747 33972931 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi06g1367 31 113 AP2-EREBP Transcription Factor Family AT5G19790 71.084 1.77e-33 124
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mibi06g1367 AP2 1.1e-14 CL0081