Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g1366 ATGCGCCCACGCACCGTAACAAAGGGTGCGCCACAAAATGAAACCTTTTCTCGTGGAATACCACGCCACCCCTCCCTCAAGAGGTGCGGGGGTTTGCGAACAGGTGATCTCGATGACGGCGACGGAGCAGGCCAATTGAGAAGCGATCGGCATAAAGAGATGCGACGGCCTGAGAGAGAGATGTGCCTATTTCCACGTGACCAAATGTGGAATATTAAAATATTGGCGTGGGATAGTTGCTCCGACGTCGATTCTTCATCCCACATCCTACAAAGTTTTCTTTTCTCCTTCTACGGTTTAATCGGCGATCTGAAAATGGATGGATCAACTGGCCGTGGTGGTGCTGGTGTGGACATGTATCTACCAAATTATAAATTGGGGAAAACACTTGGTATTGGATCCTTTGGCAAGGTGAAAATTGCAGAACATGTTCTGACAGGTCACAAAGTTGCCATTAAGATCCTCAACAAACGTAAAGTAAAGAACATGGAAATGGAAGAAAAAGTGAGAAGAGAAATCAAAATTTTAAGGTTGTTCATGCATCCTCACATCATACGACTTTACGAAGTTATAGAAACCCCAGCAGACATATTTGTTGTGATGGAGTATGTAAAATCTGGAGAGCTCTTTGACTACATAGTAGAAAAGGGTAGGTTGCAAGAAGATGAAGCTCGTAATTTTTTTCAGCAGATAATCTCTGGTGTGGAGTACTGCCACAGGAATATGGTGGCTCATAGAGACTTGAAGCCTGAGAATTTGCTGTTGGACTCCAAATGCAGTGTTAAGATTGCAGATTTTGGTCTGAGCAACGTCATGCTTGATGGTCATTTCCTTAAGACAAGTTGTGGGAGCCCAAACTATGCTGCTCCTGAGGTGATCTCTGGAAAATATTATGCTGGGCCAGAAGTAGATGTCTGGAGCTGTGGAGTAATTTTATACGCACTTCTTTGCGGCACTCTTCCGTTTGATGATGAAAACATCCCAAATCTTTTCAAGAAAATAAAGGGTGGGATATACACTCTTCCTAGTCATCTATCACCTGGTGCCAGAGATCTGATACCGAGGATGCTTAAGGTTGATCCTATGACAAGGATGACCATACCTGAGATCCGTCAACACCCATGGTTCCAAGCTCATCTCCCTCGTTATTTGGCAGTGCCACCACCCGATACTTTAGAACAAGCCAAAAAGATTGATGAGGAAATTCTTCTGGAAGTGGTTAATATGGGGTACGACAGGAATCAGTTGGTTGAATCCCTTCGCAACAGGATTCAGAATGAGGGTACTGTGGCTTATTATTTGCTATTGGACAATCGATTCCGTGTTTCGAGCGGCTATCTTGGTGCTGAGTTTCAAGAGAGTGTGGATTCTGGTTATAATCATATGCACCTTAGTGAAGTTGCTGCTCCAGCTGTTCCCAACCGCTTTCCAGGAGGATATATGGATTATCAAGCTTCTGGATTGAGGCCACAGTTCCCTGTTGAGAGAAAATGGGCCCTTGGTCTTCAGTCTCGAGCCCATCCTCGTGAAATAATGATTGAGGTCCTTAAAGCTCTGCAAGTATTGAATGTGTGTTGGAAAAAGATTGGGCACTATAACATGAAGTGCCGGTGGGCTGCTGGCATTCTGGGTGATAGTCAAGGAATGGTGAACAATCATAATCAGTACTTTGGAGATGATTCCGCAATTATTGAGGATGATGCTGTTTCTAAGTCAAATGTAATCAAGTTTGAAATGCAGCTTTACAAAACCCGTGAAGAGAAGTATCTGCTTGATCTCCAAAGGGTTCAAGGCCCACAATTTCTCTTCTTGGATCTTTGTGCTTCTTTCCTAGCACAGCTACGGGTCCTCTAG 1854 0.4412 MRPRTVTKGAPQNETFSRGIPRHPSLKRCGGLRTGDLDDGDGAGQLRSDRHKEMRRPEREMCLFPRDQMWNIKILAWDSCSDVDSSSHILQSFLFSFYGLIGDLKMDGSTGRGGAGVDMYLPNYKLGKTLGIGSFGKVKIAEHVLTGHKVAIKILNKRKVKNMEMEEKVRREIKILRLFMHPHIIRLYEVIETPADIFVVMEYVKSGELFDYIVEKGRLQEDEARNFFQQIISGVEYCHRNMVAHRDLKPENLLLDSKCSVKIADFGLSNVMLDGHFLKTSCGSPNYAAPEVISGKYYAGPEVDVWSCGVILYALLCGTLPFDDENIPNLFKKIKGGIYTLPSHLSPGARDLIPRMLKVDPMTRMTIPEIRQHPWFQAHLPRYLAVPPPDTLEQAKKIDEEILLEVVNMGYDRNQLVESLRNRIQNEGTVAYYLLLDNRFRVSSGYLGAEFQESVDSGYNHMHLSEVAAPAVPNRFPGGYMDYQASGLRPQFPVERKWALGLQSRAHPREIMIEVLKALQVLNVCWKKIGHYNMKCRWAAGILGDSQGMVNNHNQYFGDDSAIIEDDAVSKSNVIKFEMQLYKTREEKYLLDLQRVQGPQFLFLDLCASFLAQLRVL 617
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g1366 617 ProSiteProfiles Protein kinase domain profile. 124 376 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi06g1366 617 CDD AMPKA_C 495 614 - -
Mibi06g1366 617 CDD STKc_AMPK_alpha 121 376 - -
Mibi06g1366 617 CDD UBA_SnRK1_plant 398 438 - -
Mibi06g1366 617 ProSitePatterns Protein kinases ATP-binding region signature. 130 153 IPR017441 GO:0005524
Mibi06g1366 617 FunFam Non-specific serine/threonine protein kinase 115 454 - -
Mibi06g1366 617 ProSiteProfiles Kinase associated domain 1 (KA1) profile. 568 616 IPR001772 -
Mibi06g1366 617 Pfam Kinase associated domain 1 574 616 IPR001772 -
Mibi06g1366 617 SUPERFAMILY KA1-like 433 616 IPR028375 -
Mibi06g1366 617 Gene3D Transferase(Phosphotransferase) domain 1 116 456 - -
Mibi06g1366 617 Gene3D Kinase associated domain 1, KA1 501 615 - -
Mibi06g1366 617 Pfam UBA/TS-N domain 398 434 IPR015940 -
Mibi06g1366 617 SUPERFAMILY Protein kinase-like (PK-like) 121 389 IPR011009 -
Mibi06g1366 617 MobiDBLite consensus disorder prediction 1 56 - -
Mibi06g1366 617 FunFam Non-specific serine/threonine protein kinase 501 615 - -
Mibi06g1366 617 FunFam Non-specific serine/threonine protein kinase 115 203 - -
Mibi06g1366 617 PANTHER MAP/MICROTUBULE AFFINITY-REGULATING KINASE 61 419 - -
Mibi06g1366 617 SMART serkin_6 124 376 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi06g1366 617 MobiDBLite consensus disorder prediction 32 56 - -
Mibi06g1366 617 ProSitePatterns Serine/Threonine protein kinases active-site signature. 243 255 IPR008271 GO:0004672|GO:0006468
Mibi06g1366 617 SMART uba_6 399 436 IPR015940 -
Mibi06g1366 617 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 397 437 IPR015940 -
Mibi06g1366 617 Pfam Protein kinase domain 124 376 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g1366 Mibi-ChrMibi06 33959536 33969763 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi06g1366 124 377 CBL-interacting serine-threonine protein kinases AT2G26980 52.918 9.14e-91 285
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_AMPK Mibi06g1366 Pkinase 3.2e-79 CL0016