Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g1365 ATGGGTTGCATTAGCTCCAGAAATTCAGTTGCAGGAGATTCACCCGTCGTGCACACGAAGGTGAGCACCGAATATGGGTCTGCCATTGTGGGGCCCACGTCCAGATCTCGATCGGGGACTTTAGCTTCTTCTGGTAGAGGGGATAGGAAATCGGAGGATTACAGTGGAGATGGGAGGAAGTTTGGGAGGGATGGTTCTAAAGGAAGCGGGAATTACAGTGTGAAGTTAGGCCCTTCTTCGTATAGGTCGGTGGAAGCTGAGCTGAATGCGGCTGGATGGCCTCCTTGGCTCACTGTTGCTGCTGGTGAAGCTATTCATGGATGGGTCCCCCTCAGAGCTGACTCTTTTGAGAAATTAGAGAAGATTGGGCAAGGTACATATAGCAGTGTGTTTCGAGCACGTGAAGTTGAAACTGGGAGGATGTTTGCCCTGAAGAAGGTGCGGTTTGACAATTTTCATCCTGAGAGCGTGAGGTTCATGTCAAGAGAAATTACAATTCTTCGCAGGCTTCACCATCCAAACGTTATGAAATTGGAGGGTGTAATTACATCTCGACAATCAAGTACTTTATACCTAGTCTTTGAATATATGGAGCATGATCTTGCGGGACTAGTTTCTTGTCCTGACATAATGTTCAGTGATTCACAGGTGAAATGTTACATGAGGCAACTATTGAGTGGACTTGAGCACTGTCACCTGCGTGGTATCATCCATCGAGACATTAAAGTATCGAATATATTAGTAAATAATGATGGTATACTCAAGATAGGCGATTTTGGATTGGCAAATACAATTAGCTCAAGTAACAGACATCCATTAACTAGTCGCGTAGTGACTCTATGGTACCGTCCTCCTGAACTCTTGATGGGATCAACCAACTATGGATTATCTGTGGATCTATGGAGTGTGGGTTGTGTCTTTGGGGAACTCTTTCTGGGGAAACCTATCCTTAAGGGGAGAACTGAGGTTGAACAATTGCACAAAATTTTTAAGCTTTGCGGTTCACCAGCTGATGAATTCTGGAGAAAGTGCAAGCTTCCCCATGCAACAATGTTTAAACCTCAGAATACTTATGAAGGCACTTTTTTGGAAAGGTTTCAAGATATTCCAGAAACTGCTCTAGACCTATTGAAGACTCTACTATCCATTGATCCCCATGAGCGTGGGACTGCCTCGTCTGCTCTAATGTCTGAGTATTTCAACACCATGCCGTTTGCTTGTGATCCTTCAAGCCTGCCAAAATATCCACCCAGCAAAGAAATGGATGCCAAAAATCGGGAAGAGGTTCGCAGGAAAAAGGCCGAGGGTAAAGTGCACGAGGCTGCGTCATCAAGAAAGCCAAGACAAGTCCGTCAAGTTCTACAGGAACCAAACAATTTCAGTCACCTTGCTTCAACCGATGAAAAGCATAACAGTTCTAGAAAAGCTGTTAAAGACGATGTTAAAGCAAATCTTAACAGGGGAAAAGGAAAGGCTATGCAGGAGCCATCAAAGCCTTCAACAGAAGCAATGTCAGAAACCTTCCAGTACAATGGCATGCCTCATGGCTATAGCATATTAGCAGGACCAGCACCATCCTCAGGTGCTAGTGGCTTTGCATGGGCAAAAAGGAGAAAACCAGAGGCTTCGTCCATATTATCAGACGGTTCAAAAAGCAGAATTAGCGCACTTGATCCAATCTTCGCAAAAGGCACATATGATCTAACCAGACGTGTGATGGATGTGGCAGAAAGAAGATACAAGGCCAGCACAAGCCATCAGGCACATCATGGTGGACAGAAACACATTGATACATCTGATACACGTTCAAATTTATCGATGACTTTTGATTCTAATGAAAGACCAGATGGTGTGCTAAACACTCGGGTAAATTTGAAATCAAGCAACTCTTTAAAATACGATGCACTTTACAGTTCAATGACCGGATGTGGTAATTTTTGTTGCATAAAATCTTGA 1956 0.4402 MGCISSRNSVAGDSPVVHTKVSTEYGSAIVGPTSRSRSGTLASSGRGDRKSEDYSGDGRKFGRDGSKGSGNYSVKLGPSSYRSVEAELNAAGWPPWLTVAAGEAIHGWVPLRADSFEKLEKIGQGTYSSVFRAREVETGRMFALKKVRFDNFHPESVRFMSREITILRRLHHPNVMKLEGVITSRQSSTLYLVFEYMEHDLAGLVSCPDIMFSDSQVKCYMRQLLSGLEHCHLRGIIHRDIKVSNILVNNDGILKIGDFGLANTISSSNRHPLTSRVVTLWYRPPELLMGSTNYGLSVDLWSVGCVFGELFLGKPILKGRTEVEQLHKIFKLCGSPADEFWRKCKLPHATMFKPQNTYEGTFLERFQDIPETALDLLKTLLSIDPHERGTASSALMSEYFNTMPFACDPSSLPKYPPSKEMDAKNREEVRRKKAEGKVHEAASSRKPRQVRQVLQEPNNFSHLASTDEKHNSSRKAVKDDVKANLNRGKGKAMQEPSKPSTEAMSETFQYNGMPHGYSILAGPAPSSGASGFAWAKRRKPEASSILSDGSKSRISALDPIFAKGTYDLTRRVMDVAERRYKASTSHQAHHGGQKHIDTSDTRSNLSMTFDSNERPDGVLNTRVNLKSSNSLKYDALYSSMTGCGNFCCIKS 651
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g1365 651 ProSiteProfiles Protein kinase domain profile. 116 400 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi06g1365 651 SUPERFAMILY Protein kinase-like (PK-like) 109 407 IPR011009 -
Mibi06g1365 651 FunFam probable serine/threonine-protein kinase At1g54610 199 439 - -
Mibi06g1365 651 MobiDBLite consensus disorder prediction 598 613 - -
Mibi06g1365 651 ProSitePatterns Serine/Threonine protein kinases active-site signature. 236 248 IPR008271 GO:0004672|GO:0006468
Mibi06g1365 651 SMART serkin_6 116 400 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi06g1365 651 PANTHER CELL DIVISION PROTEIN KINASE 114 404 - -
Mibi06g1365 651 MobiDBLite consensus disorder prediction 583 613 - -
Mibi06g1365 651 MobiDBLite consensus disorder prediction 448 466 - -
Mibi06g1365 651 FunFam probable serine/threonine-protein kinase At1g54610 103 198 - -
Mibi06g1365 651 Pfam Protein kinase domain 116 400 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi06g1365 651 Gene3D Phosphorylase Kinase; domain 1 103 198 - -
Mibi06g1365 651 Gene3D Transferase(Phosphotransferase) domain 1 199 440 - -
Mibi06g1365 651 MobiDBLite consensus disorder prediction 24 69 - -
Mibi06g1365 651 MobiDBLite consensus disorder prediction 46 64 - -
Mibi06g1365 651 ProSitePatterns Protein kinases ATP-binding region signature. 122 145 IPR017441 GO:0005524
Mibi06g1365 651 MobiDBLite consensus disorder prediction 419 446 - -
Mibi06g1365 651 MobiDBLite consensus disorder prediction 583 597 - -
Mibi06g1365 651 MobiDBLite consensus disorder prediction 410 479 - -
Mibi06g1365 651 MobiDBLite consensus disorder prediction 26 45 - -
Mibi06g1365 651 CDD STKc_CDK9_like 116 400 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g1365 Mibi-ChrMibi06 33953732 33957814 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi06g1365 108 435 Core Cell Cycle Gene Families AT5G10270 46.647 5.03e-107 331
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Mibi06g1365 Pkinase 8.6e-69 CL0016