Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g1339 ATGGCATTCATCAACAAGATTGGAAAGCTTCTCAAGCATTCTGCTGTCAAATGCATCGGCCCAGAACTATCGGCATCTACACCATCAATTTACCAGGCAATCAGGTCCATGTCATCTGCAAAGCTTTTTATTGGAGGTGTTTCATATAGCACAGACGATATGGGTCTGAGAGAAGCCTTTGCTCGCTATGGAGAGATAATTGAAGCAAGGATAATTATGGATCGTGAGACTGGAAGGTCCAGAGGATTTGGGTTTGTAACTTTTGCATCAAGTGAGGAGGCATCTGCTGCTATTCAGGCAATGGATGGTCAGGATCTTCATGGTCGGAGGGTACGGGTAAACTATGCTACAGATAGGGCACGTCCAGGCTTTGGCGGGGGTGGCGGCGGTTATGGTGGTGGTGGTGGTTATGGCGGGGGTGGCTATGGTGGTGGTGGTGGTGGTTATGGCGGGGGTGGCTATGGTGGTGGTGGTGATGGTGGTGGTTATGGCGGGGGTGGCTATAGTAGAAGTAACTATGGAGGTGATAATAACTTTAGGACTCCAAGTTATGGAAGCAGTGGTGATGGTTTTGAGAGCAGTGGAAATTATGGTGTTCCTGATGGTGCTGGTGGCGGTAGTTACCAATTCAATCAAAACTCAGGTGTTGATATCGGCTTTGAACCAAGTGGCAATTCAAGCATGGGAGATGATGGCGGCCAATTTGGTGGCAACCAAAATGAAGGAACTGGCTTAGATCATGAAGATGACTTGAGAGAGAAGAATGATGTAGATGACTTGAGAGAGAAGAATGATGAAGATGACTTGAGAGAGAGCCGGTAG 822 0.4769 MAFINKIGKLLKHSAVKCIGPELSASTPSIYQAIRSMSSAKLFIGGVSYSTDDMGLREAFARYGEIIEARIIMDRETGRSRGFGFVTFASSEEASAAIQAMDGQDLHGRRVRVNYATDRARPGFGGGGGGYGGGGGYGGGGYGGGGGGYGGGGYGGGGDGGGYGGGGYSRSNYGGDNNFRTPSYGSSGDGFESSGNYGVPDGAGGGSYQFNQNSGVDIGFEPSGNSSMGDDGGQFGGNQNEGTGLDHEDDLREKNDVDDLREKNDEDDLRESR 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g1339 273 MobiDBLite consensus disorder prediction 179 193 - -
Mibi06g1339 273 SUPERFAMILY RNA-binding domain, RBD 25 150 IPR035979 GO:0003676
Mibi06g1339 273 FunFam Glycine-rich RNA-binding protein 3 mitochondrial 22 146 - -
Mibi06g1339 273 MobiDBLite consensus disorder prediction 243 273 - -
Mibi06g1339 273 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 42 112 IPR000504 GO:0003723
Mibi06g1339 273 MobiDBLite consensus disorder prediction 179 273 - -
Mibi06g1339 273 PANTHER HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN 87F-RELATED 36 204 - -
Mibi06g1339 273 SMART rrm1_1 41 114 IPR000504 GO:0003723
Mibi06g1339 273 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 40 118 IPR000504 GO:0003723
Mibi06g1339 273 MobiDBLite consensus disorder prediction 206 241 - -
Mibi06g1339 273 Gene3D - 22 138 IPR012677 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g1339 Mibi-ChrMibi06 33689554 33691221 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi06g1339 39 117 Eukaryotic Initiation Factors Gene Family AT1G49760 32.911 1.11e-10 60.1