Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g1334 ATGATGGCTTTCTTGGATCATAGAGATGAAGAAGAAAGTGCCAATAATCTGAAACTGGATCTTAAACATCCTGAGGAAAATGATCACTCCATCTCTCGCCAAGAACAATCAAGTTGTCCTTCTTCACTGTCCTACTCTTCAGTAGAATCAATAGTGTTAGAAAATAATGACAATGGTGTAGCTGACAATTTTGAAGCAAAGCATGCTGATAATGAACTTCCAACTTCTTCATATTCAAGCGACTATGTTTACCCATCATCCCCTGTGTGGAGCCATCAAAGTGCTTCAACCTCACAAAACCCTCCAACTCAAATGATAGCTCAATCTGGCTATGATCCAAATAGAATACCATTGTCTATATTCTGTAGCAGACCTACAAATCATTCGGCATGGAGCCATTCATCAAATGAATCTCTTTGCAGTATTCAGGCTGGAAACAATGGTTTCACAAAGGAACATTCCTTTAAAGGGGACAAATATGTAGAATCTGACAAGTTTGATGAATCAACAAGAGTTGCATTTGAGGAAACTAAAGATTCGGCTATGGTGATGCACTGTGAATCAGTAAAGACGTTGGCAGAAAGTTCAAAAAGTGTCTTGCATGAGACCCCATCAGAGGACAATAGTAAGGAAGCAATTATGGCCCCCAGGGGAGAGAGCCGTAATAGCAATCAATCTTTTCAATTTCCTCTATTGCCCGTTCAGGTTGAACGGACGACAGAAGTAGCACCAAAACTAGAGAAGCAGGTGGAAGTTAAGCCTATTGCTAAACTTGAAACAGGCCCAAGTCCTCGAAAACACTGTTGTTTACCCTCATGGTTTCACTCAGCATGTCATTTGGAAGTCCAAGGTTTAAATTTTCTGGGTCTGGAAGGCCCTTCTAGGGTTCGTGAGATGTTTCCTTCTTCTCCTACTTCACTCATCAAATGTCGTTTCTTTCACAAGCCCATCTCCCCTTTTCTTCTTCTGCAATTCTACTTCCTCTCATGGCTCTTCTTCTCGTCTAAAAGCTACGCCTTTCCCGATGATTCCGACAAATCGGTGCTTCTTCATTTCAAGAATTCGGTCTCTGATCCATCGGGGCTGCTTTCGAGCTGGAATTCGGCCGGGGATTCCGATCACTGTTCTTGGTTCGGTGTTCTCTGCGACTCTAATTCGAGAGTTGTCGCACTTAACATTACTGGAAATGGTGGTGGAAGTCATCGAAGCTCTTCTCCGTGTTCTGATTCTGCTGAATTTCCACTTTATGGGTTTGGGATTAGGAGGAGCTGTGATGGCAGTAGAGGAGCATTGTTTGGGAAGGTTTCGCCTCTCATCAGTAAGCTTACTGAGCTCAAAATTCTCTCGCTTCCTTTTAACGGTTTCGAGGGTGAAATTCCTTCTGAAATTTGGGGTATGGGAAAGTTGGTTGTTCTTGACCTAGAGGGAAATTCTATAACTGGGTCACTTCCGCCTCATTTTGATGGCTTGAGGAACTTGCGAGTTCTTAACCTTGGGTTTAATAGAATTATTGGGGAGATACCGGACTCACTTGCAAGTCTTGAAAGTTTGGAAATTTTGAATTTAGCTGCGAATGGCTTGAATGGATCTGTTCCTGGGTTTATTGGTAAGCTGAAGGGGGTGTATCTACTGTTTAATCTCCTTAGTGGGTCTATACCAGTTGAGATCGGGGATAACTGTGGGAAGCTTGAACATCTGGATTTGTCAGGTAATTTCTTAGTTCAGCCTATTCCAAGCAGTTTGGGAAATTGTAGTCAATTGCGGACACTTTTGTTGTATTCAAATTTGTTAGAAGAGGTAATTCCTTCTGAACTTGGGAAACTTCAGCTGCTTGAAGTGTTGGATGTTTCAAGAAATGCTCTCAGTGGTCCAGTACCACCCGAAATTGGGAATTGTTCGGAGCTCTCTGTACTTGTGCTGTCAAATCTTTTCAATCCACTTCCTGAAGTCAACAATACTGTAAGGGAATCTTCGCAGATGGCTTCTATAAATGATGAATTGAATTATTTTGAAGGTGCCATGCCTGTGGAAATTACATCCCTCCCAAAGCTGAGAATATTATGGGCGCCGAGGGCAACTCTGGAAGGTAGTTTCCCAAGCAGTTGGGGTGCTTGTGATAACTTAGAGATGGTCAACTTGGCTCAGAATTATTTCACTGGGGAGTTTCCTAATCAGCTTAGTGGCTGCAAGAAGCTGCATTTTCTTGATTTTAGCTCGAACAACCTTACTGGAGAGCTTGCTGAAGAACTTCATGTTCCTTGTATGACTGTATTTGATGTCAGTGGGAATATCTTGTCTGGTTCAATTCCAGAATTTTTTAATGGTTCTTGTACTTCAGTTCCTTCCTGGAATGGCAATCAGTTTGAAGCTGACAATGTCTCGATTCCATATATGTCCTTTTTCACATCAAAGGTTCATGATGGATCCCTTTTGACTTCAGTGAGAGAAGTTGGTCTTTCAGTTATTCACAATTTTGGAAACAACAACTTTACTGGCATGCAGTCATTGCCCATATCACATGACAGATTGGGGAAGAAAATGGGTTACGCGTTTCTTGTCGGAGAAAACAAACTTGCTGGGCCGTTTCCTACCAACGTATTTGATAAGTGTGATGGATTAAATGCATTGCTCTTAAATGTCAGTTATAATATGCTATCTGGCGAGATTCCTGCAAAGTTTGGCGGAATGTGCAGGTCATTAAAGTTTTTGGATGCATCCGGGAATAAGTTAACTGGACCAATCCCCGTGGGTTTAGGAGAATTGGTATCGCTTGTTTCTCTGAACCTTAGTGGGAATCAGTTACAAGGTTCTATTCCTGTCAGCCTAGGCCAGATGAAAAATGTGGTGTTTCTTTCCTTGGCCTCTAATACCTTAAGCGGCTCCATTCCTACTAGCCTGGGGCAGTTGTACTCTTTAGAAGTTTTGGACCTTTCATCCAATTCTCTCACGGGTGAGATTCCAAAGGGTTTTGAGAAGTTGAGAAATCTGACTGGTCTTCTTCTCAACAACAACAAACTTTCTGGACACATCCCTACTGGTCTTGCAAATGTCACAACACTGTCAGCATTTAATGTGTCCTTCAATAACTTGTCTGGATCATTGCCATCAAATAATAACTTGTTGAAATGCAGCAGTGCTGTTGGGAATCCATTTTTGCGTCCTTGCCATATGCTTTCTTTGACTGCGCCATCATCAGATCAACAAGGGCAGGTAGCTGATTATAATTCTAATAATGCTGCACCACCAGAAACAGCCAGCAAAGGTAGTGGGGCTGGCTTCAATTCTATTGAGATAGCATCTATAACGTCTGCATCAGCAATCGTTTCTGTTCTTATAGCCCTAATTATTCTGTTCTTTTATACCCGGAAGTGGAACTCCAGGTCCAGGGTTATTGGTTCCACAAGAAAAGAAGTTATTGTTTTTACTGATATCGGGGTTCCATTGACTTTTGAAACCGTGGTCCGTGCCACTGGTAATTTCAATGCAAGCAATTGTATTGGAAATGGAGGATTTGGAGCAACCTATAAGGCAGAAATAGCACCAGGAAATCTAGTGGCAATAAAACGCTTGTCAGTAGGGCGATTCCAAGGTGTTCAACAATTTGATGCAGAGATTAAGACCCTTGGAAGACTTCGCCATCCAAATCTTGTCACTTTATTTGGTTATCATGCCAGTGAGACTGAGATGTTTCTGATATACAATTATTTGCCGGGTGGGAACCTGGAAAAGTTCATCCAGGAGAGGTCAACAAGGGCTGTGGATTGGAGAATTCTTCACAAGATCGCATTGGACATCGCCCGAGCGCTTGCCTACCTCCATGATCAGTGTGTACCACGTGTCCTCCATCGCGATGTGAAGCCCAGCAACATACTGTTGGATGATGATTTCAATGCATACCTGTCTGACTTTGGATTGGCCAGACTTCTGGGAACTTCTGAAACCCATGCAACCACGGGGGTTGCAGGAACATTTGGTTATGTTGCACCTGAGTATGCTATGACTTGTCGGGTTTCTGACAAGGCCGATGTGTACAGTTATGGTGTTGTACTTCTAGAGTTGCTCTCAGACAAGAAGGCATTGGATCCTTCATTTTCTTCCTATGGGAATGGCTTCAACATAGTAGCTTGGGCATGCCTGCTACTTCGGCAAGGCAGAGCAAAGGAGTTTTTCACAGCTGGGTTATGGGATGCAGGGCCTGCAGATGATTTGGTGGAGGTGTTGCACTTGGCCATCATGTGTACCGTTGATTCGCTCTCGACGAGACCTTCAATGAAACAGGTTGTACGGAGGCTAAAGCAACTACAACCTCCATCATGCTAG 4320 0.4301 MMAFLDHRDEEESANNLKLDLKHPEENDHSISRQEQSSCPSSLSYSSVESIVLENNDNGVADNFEAKHADNELPTSSYSSDYVYPSSPVWSHQSASTSQNPPTQMIAQSGYDPNRIPLSIFCSRPTNHSAWSHSSNESLCSIQAGNNGFTKEHSFKGDKYVESDKFDESTRVAFEETKDSAMVMHCESVKTLAESSKSVLHETPSEDNSKEAIMAPRGESRNSNQSFQFPLLPVQVERTTEVAPKLEKQVEVKPIAKLETGPSPRKHCCLPSWFHSACHLEVQGLNFLGLEGPSRVREMFPSSPTSLIKCRFFHKPISPFLLLQFYFLSWLFFSSKSYAFPDDSDKSVLLHFKNSVSDPSGLLSSWNSAGDSDHCSWFGVLCDSNSRVVALNITGNGGGSHRSSSPCSDSAEFPLYGFGIRRSCDGSRGALFGKVSPLISKLTELKILSLPFNGFEGEIPSEIWGMGKLVVLDLEGNSITGSLPPHFDGLRNLRVLNLGFNRIIGEIPDSLASLESLEILNLAANGLNGSVPGFIGKLKGVYLLFNLLSGSIPVEIGDNCGKLEHLDLSGNFLVQPIPSSLGNCSQLRTLLLYSNLLEEVIPSELGKLQLLEVLDVSRNALSGPVPPEIGNCSELSVLVLSNLFNPLPEVNNTVRESSQMASINDELNYFEGAMPVEITSLPKLRILWAPRATLEGSFPSSWGACDNLEMVNLAQNYFTGEFPNQLSGCKKLHFLDFSSNNLTGELAEELHVPCMTVFDVSGNILSGSIPEFFNGSCTSVPSWNGNQFEADNVSIPYMSFFTSKVHDGSLLTSVREVGLSVIHNFGNNNFTGMQSLPISHDRLGKKMGYAFLVGENKLAGPFPTNVFDKCDGLNALLLNVSYNMLSGEIPAKFGGMCRSLKFLDASGNKLTGPIPVGLGELVSLVSLNLSGNQLQGSIPVSLGQMKNVVFLSLASNTLSGSIPTSLGQLYSLEVLDLSSNSLTGEIPKGFEKLRNLTGLLLNNNKLSGHIPTGLANVTTLSAFNVSFNNLSGSLPSNNNLLKCSSAVGNPFLRPCHMLSLTAPSSDQQGQVADYNSNNAAPPETASKGSGAGFNSIEIASITSASAIVSVLIALIILFFYTRKWNSRSRVIGSTRKEVIVFTDIGVPLTFETVVRATGNFNASNCIGNGGFGATYKAEIAPGNLVAIKRLSVGRFQGVQQFDAEIKTLGRLRHPNLVTLFGYHASETEMFLIYNYLPGGNLEKFIQERSTRAVDWRILHKIALDIARALAYLHDQCVPRVLHRDVKPSNILLDDDFNAYLSDFGLARLLGTSETHATTGVAGTFGYVAPEYAMTCRVSDKADVYSYGVVLLELLSDKKALDPSFSSYGNGFNIVAWACLLLRQGRAKEFFTAGLWDAGPADDLVEVLHLAIMCTVDSLSTRPSMKQVVRRLKQLQPPSC 1439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g1334 1439 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1280 1292 IPR008271 GO:0004672|GO:0006468
Mibi06g1334 1439 FunFam LRR receptor-like serine/threonine-protein kinase RPK2 1124 1235 - -
Mibi06g1334 1439 SMART LRR_typ_2 490 514 IPR003591 -
Mibi06g1334 1439 SMART LRR_typ_2 608 632 IPR003591 -
Mibi06g1334 1439 SMART LRR_typ_2 466 489 IPR003591 -
Mibi06g1334 1439 SMART LRR_typ_2 969 992 IPR003591 -
Mibi06g1334 1439 SMART LRR_typ_2 921 945 IPR003591 -
Mibi06g1334 1439 SMART LRR_typ_2 560 584 IPR003591 -
Mibi06g1334 1439 SMART LRR_typ_2 993 1016 IPR003591 -
Mibi06g1334 1439 FunFam LRR receptor-like serine/threonine-protein kinase RPK2 1236 1438 - -
Mibi06g1334 1439 CDD STKc_IRAK 1166 1434 - -
Mibi06g1334 1439 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 606 1433 - -
Mibi06g1334 1439 FunFam Leucine-rich repeat receptor protein kinase EMS1 964 1047 - -
Mibi06g1334 1439 Gene3D Ribonuclease Inhibitor 542 749 IPR032675 -
Mibi06g1334 1439 Gene3D Ribonuclease Inhibitor 750 1062 IPR032675 -
Mibi06g1334 1439 Pfam Protein kinase domain 1163 1361 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi06g1334 1439 ProSiteProfiles Protein kinase domain profile. 1160 1434 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi06g1334 1439 FunFam Leucine-rich repeat receptor protein kinase EMS1 552 650 - -
Mibi06g1334 1439 SUPERFAMILY L domain-like 371 603 - -
Mibi06g1334 1439 MobiDBLite consensus disorder prediction 1066 1088 - -
Mibi06g1334 1439 FunFam Leucine-rich repeat receptor protein kinase EMS1 864 963 - -
Mibi06g1334 1439 SUPERFAMILY L domain-like 538 1060 - -
Mibi06g1334 1439 SUPERFAMILY Protein kinase-like (PK-like) 1142 1431 IPR011009 -
Mibi06g1334 1439 MobiDBLite consensus disorder prediction 1 41 - -
Mibi06g1334 1439 Pfam Leucine rich repeat N-terminal domain 343 383 IPR013210 -
Mibi06g1334 1439 ProSitePatterns Protein kinases ATP-binding region signature. 1166 1188 IPR017441 GO:0005524
Mibi06g1334 1439 Gene3D Ribonuclease Inhibitor 342 541 IPR032675 -
Mibi06g1334 1439 FunFam LRR receptor-like serine/threonine-protein kinase RPK2 659 836 - -
Mibi06g1334 1439 Gene3D Transferase(Phosphotransferase) domain 1 1236 1436 - -
Mibi06g1334 1439 Pfam Leucine Rich Repeat 562 584 IPR001611 GO:0005515
Mibi06g1334 1439 SMART serkin_6 1160 1438 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi06g1334 1439 MobiDBLite consensus disorder prediction 1 32 - -
Mibi06g1334 1439 Gene3D Phosphorylase Kinase; domain 1 1122 1235 - -
Mibi06g1334 1439 Pfam Leucine rich repeat 951 1006 IPR001611 GO:0005515
Mibi06g1334 1439 Pfam Leucine rich repeat 469 527 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g1334 Mibi-ChrMibi06 33652824 33660064 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi06g1334 343 1439 Receptor kinase-like Gene Family AT3G02130 67.265 0.0 1416
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XV Mibi06g1334 Pkinase 5.1e-43 CL0016