Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g1310 ATGGTAGCTACTACGATGATGATGGGTTCAGAGAAATCGTGGAAGAAAGGGCCTTGGACTCTTGAAGAGGATAAACTGCTTAGTGAATATGTGAGCTTGCATGGTGAAGGAAGGTGGAGTTCAGTGGCCAAGTTTACAGGGTTAAATAGGAGTGGGAAAAGTTGCAGGCTGAGGTGGGTGAACTATTTGAAACCAGGCCTGAAGAAAGGCCACTTAACACCTCAAGAAGAAGCCATCATATCTGAAATCCATGCCATGTTAGGCAACAAGTGGTCTACAATAGCAAAATATTTGCCAGGTAGAACCGACAATGAGATTAAGAACTATTGGAGAACACACTTCAAGAAGAAAGACAAAGCCTCTCGTATTAATAAGAGGCAAGAAAACAGAAGATCGAGAATTCTAAAACAGATGAAACAACAAGAGCAACATCAGCAGCAGCAGCAACCTCAGCAGTACAATAATGATGTGCAAAGTGATCAAACAAACAATAACGTTTCTTCTGGGAATGTTCTAGAAGACAATAACTACCATCCAGTAGTTACCACCATGGAAGATCAATATAATTACTTGCCTTTCATGTACCAAGATTACTATCATCCATCCCCGTGGCCTGAAAATAATACTGTAGAACAAGATGAAGGCTTGTGGGTTACGTTATGGAACCTTGACGATGAAGAAACACATGCTTATCATGGGGACAATCATCATCAGTTCAACGAAAATGCCATTCATCATCACAACCAAATTACAGCTTCTTGTTTCGATGATATTTCCAACAACCTCTGCTTTGCTAAATACATGTCCGGCTGA 813 0.4071 MVATTMMMGSEKSWKKGPWTLEEDKLLSEYVSLHGEGRWSSVAKFTGLNRSGKSCRLRWVNYLKPGLKKGHLTPQEEAIISEIHAMLGNKWSTIAKYLPGRTDNEIKNYWRTHFKKKDKASRINKRQENRRSRILKQMKQQEQHQQQQQPQQYNNDVQSDQTNNNVSSGNVLEDNNYHPVVTTMEDQYNYLPFMYQDYYHPSPWPENNTVEQDEGLWVTLWNLDDEETHAYHGDNHHQFNENAIHHHNQITASCFDDISNNLCFAKYMSG 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g1310 270 CDD SANT 73 114 IPR001005 -
Mibi06g1310 270 MobiDBLite consensus disorder prediction 135 175 - -
Mibi06g1310 270 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 68 118 IPR017930 -
Mibi06g1310 270 ProSiteProfiles Myb-like domain profile. 11 63 IPR001005 -
Mibi06g1310 270 ProSiteProfiles Myb-like domain profile. 64 114 IPR001005 -
Mibi06g1310 270 SUPERFAMILY Homeodomain-like 13 110 IPR009057 -
Mibi06g1310 270 Pfam Myb-like DNA-binding domain 72 113 IPR001005 -
Mibi06g1310 270 Pfam Myb-like DNA-binding domain 16 63 IPR001005 -
Mibi06g1310 270 Gene3D - 15 68 - -
Mibi06g1310 270 PANTHER TRANSCRIPTION FACTOR MYB33-RELATED 13 240 - -
Mibi06g1310 270 CDD SANT 18 63 IPR001005 -
Mibi06g1310 270 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 11 67 IPR017930 -
Mibi06g1310 270 FunFam Myb transcription factor 16 68 - -
Mibi06g1310 270 Gene3D - 72 117 - -
Mibi06g1310 270 MobiDBLite consensus disorder prediction 139 175 - -
Mibi06g1310 270 Coils Coil 124 144 - -
Mibi06g1310 270 SMART sant 15 65 IPR001005 -
Mibi06g1310 270 SMART sant 68 116 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g1310 Mibi-ChrMibi06 33427654 33429142 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi06g1310 15 233 MYB Transcription Factor Family AT3G30210 51.131 4.67e-69 213
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mibi06g1310 Myb_DNA-binding 2.4e-17 CL0123