Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g1304 ATGGGTTCTGTTTGTTGTTGTATGAGTGCTGATGAAATTGAAGATTATGTAAATCGAAATAGTTCTGTATATAGGAATTGTGCGTGTCTCGATTGCTTCTTACAGAACTTTTCGCATGTGTATTCAGCAATATTCCGCAGAGGGGAAGTGCATTCGCTTCCTTCATCTATACAGGGGGCAGCATCTATGACTTCTACAGCATCACTTGATAATTCATTATCTGACATGTACCATTCTCCTCCGAGGCCCTTGCCTTATGATGTAGACTACAGGCATTTCCGCTCTTTAAGACATGACAAAGGTTCAAGTCATTTGAATGAAGAGTCAGAACCTCTGAGAGGTGATTTAGATGGAGATCAAGAATCTTTAAATTCTGGAGGCAAATGGAATGAATCTTCCTGCGAAGATGCTTCAAAGGAATACAAATCTAAGTCCTCAGTTAGGATCTCGTCAGCAAAATATACAAGTGGAGCTGGGCTTGTTTATGCATCATCAGAAGAGGAGGATTGTTGCCCAACTTGTCTTGAAGAATACACCGAAGAGAACCCAAGGATATTGACAAAGTGCAATCATCATTTTCATCTCAGTTGCATTTATGAATGGATGGAGAGAAGTGAGAATTGTCCTGTTTGTGGGAAGGTGATGGTATTCGATGAAACAACTTAA 666 0.4009 MGSVCCCMSADEIEDYVNRNSSVYRNCACLDCFLQNFSHVYSAIFRRGEVHSLPSSIQGAASMTSTASLDNSLSDMYHSPPRPLPYDVDYRHFRSLRHDKGSSHLNEESEPLRGDLDGDQESLNSGGKWNESSCEDASKEYKSKSSVRISSAKYTSGAGLVYASSEEEDCCPTCLEEYTEENPRILTKCNHHFHLSCIYEWMERSENCPVCGKVMVFDETT 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g1304 221 Pfam RING-H2 zinc finger domain 166 211 IPR024766 GO:0008270
Mibi06g1304 221 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 139 218 IPR013083 -
Mibi06g1304 221 SMART ring_2 171 211 IPR001841 -
Mibi06g1304 221 SUPERFAMILY RING/U-box 166 218 - -
Mibi06g1304 221 MobiDBLite consensus disorder prediction 99 117 - -
Mibi06g1304 221 MobiDBLite consensus disorder prediction 99 133 - -
Mibi06g1304 221 ProSiteProfiles Zinc finger RING-type profile. 171 211 IPR001841 -
Mibi06g1304 221 PANTHER ZINC FINGER, RING/FYVE/PHD-TYPE 60 219 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g1304 Mibi-ChrMibi06 33384881 33387830 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi06g1304 1 219 C3H Transcription Factor Family AT5G38895 58.182 1.31e-93 275