Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g1301 ATGATCGCTGTTCATGCCAAGTTGGACCTCTCTAGCACCACTCTTTTGCAAGATGATTTCATCGTTTACATCAAGAGAGGTCAAACAATGGTTCGCCAAGCTACTTTAGTTATTATTGGTGTCACTGTTGGCGTGGCCTTTGGAATTTTAATCGCTGCCCTTATATTTTTTGGGATAAGGTGGTATAAGAAGCATGCTCGTGTTACCCACTCTGCGAAAGAGAGTAGTTTGACCACTCTTCCAATACGCACACATGGATTAGGAACAAGCACTGACTTTAGTGCCTCTCTTACAAGTTCCATACACAATTCGATGCCAGAAAATTTGCATAGAAATTCCAATTTCTCCTGGTGGAGTCATCAAAACAAAGATCGGTTTTCTCCGACATCTGGCATTTCAAAGTACTCATATAAAGAAATCCAAAAGGCCACACAGAATTTCACAACTATTTTGGGACAAGGATCATTTGGCACAGTTTATAAAGCCACAATGCCTGCAGGAGAGGTGGTAGCTGTGAAGGTGCTTGACTCTAATTCTAAACAAGGGGAGAAAGAATTCCAAACAGAGGTGCTTTTGTTGGGAAGATTGCATCATCGTAATCTTGTGAATTTAGTAGGATATTGTGTAGATAAAGGACAGCGTATTCTGGTTTATGAGTTCATGAGCAATGGAAGTTTGTCTAACCTCCTATACAGTGAAGTAAAGGCTTTGAGTTGGAACGAAAGGCTTCAAATTGTTATTGATATTTCACATGGAATTGAATATCTTCATGAAGGAGCAGTCCCTCCTGTTATACATCGTGATTTGAAGTCTGCCAATATATTGTTAGATCATTCAATGAGAGCTAAGGTTGCTGATTTTGGGTTGTCAAAGGAAGAGGTCTTTGATGGCCGGAATTCAGGCCTTAAAGGTACATACGGCTACATGGACCCAGCAAACATTTCCACAAACACATTCACAATGAAGAGTGACATCTACAGTTTTGGGATCATCATTTTTGAGCTCATTACAGCAATTCATCCACATCAAAATTTGATGGAATATATTAACCTTGCTGCAATGGATCATGATGGCGTAGATGAGATACTTGACAAACAACTTGTAGGAAAATGCAACCTTGAAGAAGTAAGGCAGCTTGCTAAAATTGCTTACAAATGTTTGCACAAATCTCCCCGGAAACGCCCCTCCATCGGTGAGATTTCACAGGGGATATTGAGAATAAAAGAAAGACGTCTTATGAAAGAATATGATACCTTGTCATTTGCGGGCAGTAACTTCTCCAGAGCTTTGAGTCGAATAGAAGATCAACAAGTTGAATTAAATAGGTTGACCACCTTGAACCACAGAGAAACTGGATGA 1359 0.3996 MIAVHAKLDLSSTTLLQDDFIVYIKRGQTMVRQATLVIIGVTVGVAFGILIAALIFFGIRWYKKHARVTHSAKESSLTTLPIRTHGLGTSTDFSASLTSSIHNSMPENLHRNSNFSWWSHQNKDRFSPTSGISKYSYKEIQKATQNFTTILGQGSFGTVYKATMPAGEVVAVKVLDSNSKQGEKEFQTEVLLLGRLHHRNLVNLVGYCVDKGQRILVYEFMSNGSLSNLLYSEVKALSWNERLQIVIDISHGIEYLHEGAVPPVIHRDLKSANILLDHSMRAKVADFGLSKEEVFDGRNSGLKGTYGYMDPANISTNTFTMKSDIYSFGIIIFELITAIHPHQNLMEYINLAAMDHDGVDEILDKQLVGKCNLEEVRQLAKIAYKCLHKSPRKRPSIGEISQGILRIKERRLMKEYDTLSFAGSNFSRALSRIEDQQVELNRLTTLNHRETG 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g1301 452 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 32 409 - -
Mibi06g1301 452 SMART serkin_6 145 413 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi06g1301 452 CDD STKc_IRAK 151 407 - -
Mibi06g1301 452 FunFam Calcium/calmodulin-regulated receptor-like kinase 1 119 220 - -
Mibi06g1301 452 Gene3D Phosphorylase Kinase; domain 1 111 220 - -
Mibi06g1301 452 Gene3D Transferase(Phosphotransferase) domain 1 221 423 - -
Mibi06g1301 452 SUPERFAMILY Protein kinase-like (PK-like) 116 401 IPR011009 -
Mibi06g1301 452 ProSitePatterns Protein kinases ATP-binding region signature. 151 173 IPR017441 GO:0005524
Mibi06g1301 452 Pfam Protein tyrosine and serine/threonine kinase 147 402 IPR001245 GO:0004672|GO:0006468
Mibi06g1301 452 ProSitePatterns Serine/Threonine protein kinases active-site signature. 264 276 IPR008271 GO:0004672|GO:0006468
Mibi06g1301 452 ProSiteProfiles Protein kinase domain profile. 145 405 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi06g1301 452 FunFam Calcium/calmodulin-regulated receptor-like kinase 2 221 429 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g1301 Mibi-ChrMibi06 33349403 33353459 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi06g1301 131 400 Receptor kinase-like Gene Family AT3G19300 42.294 1.19e-69 231
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-2 Mibi06g1301 PK_Tyr_Ser-Thr 9e-51 CL0016