Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g1284 ATGTCAATGTATAAGAAGAAGAAGATGCTGATGAAAGAAGGGAACGGCATATGTGACACGTGTCGCTCCGCTCCCTGCACTGTCTACTGCGGTGCTGACATGGCCTACCTGTGCGGCGGCTGTGACGCCCGCATCCACAGCGGCGGCGCCACACGCCGCCACGAGCGCGTGTGGGTGTGCGAGGCATGTGAACGCGCCCCCGCCGCTTTTCTTTGCAAAGCAGACGCCGCCTCCCTCTGCGCCGCCTGCGACGCCGACATCCACTCCGCCAACCCCCTGGCCAGCCGCCACCACCGTGTCCCCATCCTCCCTTATGGCGGCGGCGGCGGGGATGACGGTGGTTTTCTAGCTGAGGATGATGATGATGATGATGAGGAGGAGGAAGAGGAGGAGGAGGAGGTTGTGGATGAGGATGATGAAGATGAGGCTGCCTCATGGTTGTTGCTTAACAACCAAACCAACGGTAATAACAACAATCAGAGTGGTAATGGGTTTTTGTTTGGTTCTGGGGAGGTTGATGATTATTTGGACCTCATGGATTGTAATTCTTGTGCTGCTGATGATCACACTCATCATTACACTCAGCAGCAGCAGCAGCATCATTATGGTGTTGTTCCTCATAAGAACTATGCTGGTGATAGTGTTGTTCCTGTTCAGCAGCCGCAGCAGCATTTTCAGTTGGGTTTGGAGTTTGATTCTTCAAAAGCTGCCTACAGCGTTTTCAATGGTTCTGTTACTCAGAATGTTTCGATTTCGTCAATAGATGTTGGCATTGTACCAGAATCAACTATCAGCGATGGCTCCATTTCTCATTCAAGGCCTCCAAAAGGAACAATTGACCTATTTTCTGGGCCGCCAATTCAGATTCCATCGCAGCTTAGTCCGATGGACAGGGAGGCTAGGGTGTTAAGATACAGGGAGAAGAAGAAGACAAGAAAGTTTGAGAAGACAATAAGGTATGCCTCTAGGAAGGCTTATGCAGAGACAAGACCTCGTATCAAAGGTCGATTTGCTAAGAGAACAGAGGTTGAAGCTGAAGTGGACCAAATGTTCTCTACTACTTCTCTAATGGCCAAAAGTGGATACGGCATTGTTCCTTCTTTCTGA 1107 0.5041 MSMYKKKKMLMKEGNGICDTCRSAPCTVYCGADMAYLCGGCDARIHSGGATRRHERVWVCEACERAPAAFLCKADAASLCAACDADIHSANPLASRHHRVPILPYGGGGGDDGGFLAEDDDDDDEEEEEEEEEVVDEDDEDEAASWLLLNNQTNGNNNNQSGNGFLFGSGEVDDYLDLMDCNSCAADDHTHHYTQQQQQHHYGVVPHKNYAGDSVVPVQQPQQHFQLGLEFDSSKAAYSVFNGSVTQNVSISSIDVGIVPESTISDGSISHSRPPKGTIDLFSGPPIQIPSQLSPMDREARVLRYREKKKTRKFEKTIRYASRKAYAETRPRIKGRFAKRTEVEAEVDQMFSTTSLMAKSGYGIVPSF 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g1284 368 MobiDBLite consensus disorder prediction 114 141 - -
Mibi06g1284 368 MobiDBLite consensus disorder prediction 102 141 - -
Mibi06g1284 368 ProSiteProfiles Zinc finger B-box type profile. 55 102 IPR000315 GO:0008270
Mibi06g1284 368 CDD Bbox1_BBX-like 17 59 - -
Mibi06g1284 368 Pfam CCT motif 298 340 IPR010402 GO:0005515
Mibi06g1284 368 ProSiteProfiles Zinc finger B-box type profile. 13 59 IPR000315 GO:0008270
Mibi06g1284 368 CDD Bbox1_BBX-like 59 102 - -
Mibi06g1284 368 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 18 355 IPR045281 GO:0009909
Mibi06g1284 368 ProSiteProfiles CCT domain profile. 298 340 IPR010402 GO:0005515
Mibi06g1284 368 Pfam B-box zinc finger 57 102 IPR000315 GO:0008270
Mibi06g1284 368 SMART bboxneu5 55 102 IPR000315 GO:0008270
Mibi06g1284 368 SMART bboxneu5 13 54 IPR000315 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g1284 Mibi-ChrMibi06 33210349 33212648 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi06g1284 9 368 C2C2-CO-like Transcription Factor Family AT3G02380 53.704 5.08e-121 352
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-CO-like Mibi06g1284 zf-B_box 4e-07 No_clan