Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g1279 ATGGAGGAGGATGAGATTTCAGCACAAGCTTGTAAATTTCCTAGACTTGAAAATGGCAGAAACAACCCCAACAAGATTATAGGAACAGAAGAAAATGAAGAGATGGTGATGATGAGAAGAGGAGGAGGAGTAGTTGGTGGCGGCGGCGATGTGGTGAGCTCAAATAGGTTCCATGGTTGGCACCACCATTCTTCAAGAATCATTAGGGTTTCAAGAGCATCTGGAGGCAAAGATCGACACAGCAAGGTCATGACTTCAAAGGGTTTAAGAGACAGAAGGGTTAGGCTCTCTGTAGCCACAGCTATTCAGTTCTATGATCTTCAAGATCGGCTTGGCTATGACCAACCCAGTAAAGCTGTGGAGTGGCTAATCAAAGCAGCTTCTGATGCCATTTCTGAGCTTCCTTCTCTTAACAACACTTTCCCTGAAACCCCAAAGCATCAGCCAAGCGATGAGAAAAGAGTGGGGGGTATTTTGGGAACAGAACTTCAAGGGTTTGCTGATAATGCAGAGGAAGATGGTGAAGGTGATGAACATTATCATAATCAGACTCAAAGTCAGAACCTTTCTTTGTCTAAGTCTGCTTGTAGTAGCAATTCTGAGACAAGCAAAGGCTCTGGTGGCTTGTCCCTCTCAAGGTCTGAGATTCGAGTGAAGGCCAGAGAGAGGGCAAGAGAGAGAGCTGCAAAAGAGAAGGAGAAAGAGAACACTACAAATACTACACATCATCCCCACAACCCCATTTCTCAAACTGCTTCTTTCACTGAGCTTCTCACCGGAGGGATTAATATTAATACTAGTAGTAGTACCATTCCGGCCACTGTGAGTCCTACTGGTGATGATGAACATGATCATGAGCCTAATTTGTTCAACAAGGCAGCTAGGCAGCAATGGTGTACAACAACAGCCATGGACTATTTTAACTCAGGCCTTGTGGGGAATCATCATTCTATTAGAACTCATAATCATAACAATCAAGCTTCTTCAGGGTTTTCATCAGGGCAAATCCAATTGGGAAACTCTTCTTTTCCTCTCCAGGCTGCATTGTCTGTTTCTCCATTCAATGTTGTTGGGGGTGAAAGTCAGTCAGATCATCAGCTCCAGAATTTCTCATCCATGCCTGACCATCATCATCATCATCATCATCTCATAGCCAGTGGAAGCAGTGACTATAACCTCAACTTCACTATATCTCCTTCTTCTTCTTCTGCAGGCCTTGCTGGTTTCAATAGGGGGACCCTTCAGTCCAATTCACCGTCTCTTTTGCCTCACCCTCTTCATCAGAGGTTTTCTTCTTCTTCTTCTTCTTTAGACGGATCCAATCTACCTTTCTTCATTGGAGCTGCACCAACCATGGAGAATCACCACCACCACCAACAGTTCTCATCTGGATTTGATGGCCGTTTGCAGCTATGTTATGGCGACCTAACCCGCCATTCTGACCACAACAAGGGAAAAGGCGGCAAGAACTGA 1473 0.4487 MEEDEISAQACKFPRLENGRNNPNKIIGTEENEEMVMMRRGGGVVGGGGDVVSSNRFHGWHHHSSRIIRVSRASGGKDRHSKVMTSKGLRDRRVRLSVATAIQFYDLQDRLGYDQPSKAVEWLIKAASDAISELPSLNNTFPETPKHQPSDEKRVGGILGTELQGFADNAEEDGEGDEHYHNQTQSQNLSLSKSACSSNSETSKGSGGLSLSRSEIRVKARERARERAAKEKEKENTTNTTHHPHNPISQTASFTELLTGGININTSSSTIPATVSPTGDDEHDHEPNLFNKAARQQWCTTTAMDYFNSGLVGNHHSIRTHNHNNQASSGFSSGQIQLGNSSFPLQAALSVSPFNVVGGESQSDHQLQNFSSMPDHHHHHHHLIASGSSDYNLNFTISPSSSSAGLAGFNRGTLQSNSPSLLPHPLHQRFSSSSSSLDGSNLPFFIGAAPTMENHHHHQQFSSGFDGRLQLCYGDLTRHSDHNKGKGGKN 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g1279 490 MobiDBLite consensus disorder prediction 135 154 - -
Mibi06g1279 490 Pfam TCP family transcription factor 75 234 IPR017887 -
Mibi06g1279 490 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 62 430 IPR005333 GO:0003700
Mibi06g1279 490 MobiDBLite consensus disorder prediction 169 248 - -
Mibi06g1279 490 MobiDBLite consensus disorder prediction 215 240 - -
Mibi06g1279 490 MobiDBLite consensus disorder prediction 418 437 - -
Mibi06g1279 490 ProSiteProfiles R domain profile. 214 232 IPR017888 -
Mibi06g1279 490 MobiDBLite consensus disorder prediction 181 210 - -
Mibi06g1279 490 MobiDBLite consensus disorder prediction 1 25 - -
Mibi06g1279 490 ProSiteProfiles TCP domain profile. 76 134 IPR017887 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g1279 Mibi-ChrMibi06 33065219 33066691 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi06g1279 55 487 TCP Transcription Factor Family AT4G18390 43.545 2.30e-81 255
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Mibi06g1279 TCP 1.6e-40 No_clan