Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g1258 ATGCCCACTCGATGGTCCTTCCAGGATTTTAAATTGTACTATGACGCCAAGTTTGGTAGAAAGAAAGTCTTGGAGAATGGCGACACGGTCGATAATACCGTCAGTAATGGAAATGGCAATCTGCATCCCAAGAGAACATCGGATACGGCTATCTATGAGCAGTTTCAGAGCCAGGGGCAGAATTCAAACCACTCAAATGGTGCTTTACCAAGCAATGTTGGTGATAGGCCACAGAAGTCTTTGCTTCCTCCTTTTGAATCTGCAGAAATGCGTACTTTGGCAGAGAGCTTAAGTAGGGATATTATTCGTGGGAGTCCTGATGTGAAGTGGGAAAGCATCAAGGGGTTAGAAACAGCCAAACACTTACTGAAAGAGGCTGTTGTAATGCCAATCAAGTATCCCAAATACTTTACTGGTCTATTATCACCGTGGAAAGGTATTCTTCTCTTTGGGCCACCGGGTACTGGAAAGACAATGCTTGCAAAGGCCGTTGCAACAGAGTGTAAGACTACATTTTTTAATATCTCTGCATCATCTGTTGTCAGCAAATGGAGAGGCATGCTACCTTGTATTGCAGGCGATTCAGAGAAGTTAGTTAGGGTTCTATTTGAGCTTGCTAGGCACCATGCACCGTCAACAATATTTCTCGATGAGATTGATGCAATCATTAGTCAACGTGGTGAATCACGCAGTGAGCATGAAGCAAGTAGGCGGTTAAAGACTGAGCTACTTATACAGATGGATGGCTTGACAAGGACTGATGAACTTGTTTTTGTTTTGGCGGCAACAAATATTCCCTGGGAACTTGACTCAGCCATGCTCCGACGTCTTGAGAAGCGAATCCTTGTGCCACTTCCTGAACCAGAAGCAAGAAAAGCAATGTTTGAGGAACTCCTTCCACCTCAGCCTGGTGAGGAGCAGATCCCCTATGATTTACTGGTGGAGCAGACAGAAGGATATTCAGGTTCAGATATCCGGTTACTCTGCAAAGAGGCAGCAATGCAGCCATTAAGGCGCTTAATGTCACAACTTGAACAGAGAGAAGAGGTGGTGCCAGAAGAAGAGCTGCCAAAAGTAGGGGCTATCGGACCTAATGATATAGAGGTTGCTTTGAAGAACACAAGGCCGTCTGCTCATCTCCATGCCCACAAATATGAGAAGTTCAATGCTAATTATGGAAGCCAAATACTGCGATGA 1197 0.4495 MPTRWSFQDFKLYYDAKFGRKKVLENGDTVDNTVSNGNGNLHPKRTSDTAIYEQFQSQGQNSNHSNGALPSNVGDRPQKSLLPPFESAEMRTLAESLSRDIIRGSPDVKWESIKGLETAKHLLKEAVVMPIKYPKYFTGLLSPWKGILLFGPPGTGKTMLAKAVATECKTTFFNISASSVVSKWRGMLPCIAGDSEKLVRVLFELARHHAPSTIFLDEIDAIISQRGESRSEHEASRRLKTELLIQMDGLTRTDELVFVLAATNIPWELDSAMLRRLEKRILVPLPEPEARKAMFEELLPPQPGEEQIPYDLLVEQTEGYSGSDIRLLCKEAAMQPLRRLMSQLEQREEVVPEEELPKVGAIGPNDIEVALKNTRPSAHLHAHKYEKFNANYGSQILR 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g1258 398 CDD AAA 114 285 - -
Mibi06g1258 398 MobiDBLite consensus disorder prediction 58 73 - -
Mibi06g1258 398 Gene3D - 106 389 IPR027417 -
Mibi06g1258 398 Pfam AAA+ lid domain 311 348 IPR041569 -
Mibi06g1258 398 Gene3D - 286 374 - -
Mibi06g1258 398 Pfam ATPase family associated with various cellular activities (AAA) 147 284 IPR003959 GO:0005524|GO:0016887
Mibi06g1258 398 FunFam Katanin p60 ATPase-containing subunit A-like 2 106 297 - -
Mibi06g1258 398 PRINTS Endopeptidase La (Lon) serine protease (S16) signature 151 170 - -
Mibi06g1258 398 PRINTS Endopeptidase La (Lon) serine protease (S16) signature 290 308 - -
Mibi06g1258 398 MobiDBLite consensus disorder prediction 58 84 - -
Mibi06g1258 398 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 106 380 IPR027417 -
Mibi06g1258 398 SMART AAA_5 143 287 IPR003593 -
Mibi06g1258 398 PANTHER AAA DOMAIN-CONTAINING 58 394 - -
Mibi06g1258 398 FunFam Katanin p60 ATPase-containing subunit A-like 2 286 374 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g1258 Mibi-ChrMibi06 32800292 32807228 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi06g1258 141 357 Calmodulin-binding Proteins AT3G56690 35.874 1.75e-29 119