Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g1249 ATGTCACTTTCCTGTGCCAAAAACTTCTTCCAAAGGTTCTGGGTCGATGAATTCCAAATGGGGAGTTTTGCACATAGCAGCTTTCTGTCTAGTGATCTCCTGCCATCCCTTGGAGCCCGAATCAACCAAGAAAATAGACTTCGAAGATACGTAATCTCCCCTTTTAACCCCTGGTATAGGGCTTGGGAGATGTTACTAATTATCCTGGTCATCTACTCAGCATGGATTTGCCCCTTTGAGTTTGCATTTCTTCCTTACAAGCAAGATGCACTATTTATCTTTGACAACACCATCAATGGCTTCTTTGCCATTGACATAGTCATGACATTCTTTGTTGCATATCTAGATAGCCACTCATACCTTCTTGTTGACGATCACAAGAAAATTGCAGCAAGGTACCTTTCTTGCTGGTTCATTTTTGATGTCTGCTCAACGGCACCGTTCCAGTCCATCAGCCTACTCTTCACTAAACATAGTGGTGAGCTTGGCTTTAAACTACTTAGCATGCTTCGATTATGGAGACTGAGACGTGTCAGCTTTCTGTTTGCAAGGCTTGAGAAAGATATCCGCTTCAATTATTTCTGGACTAGGTGCACAAAGCTCATTTCTGTAACCTTGTTTGCAGTGCACTGTGCTGGATGCTTTAATTATCTGCTTGCAGATAGATACCCTGATTCTACTAGGACTTGGATTGGTGCTGTGTTCCCAAATTATAAAGAACTAAGTCTCTGGGACAAATATGTAACTTCAATATATTGGTCCATTGTCACGCTTACAACTACAGGCTACGGGGACTTACATGCTGAAAACACAGGAGAGATGCTGTTTGATATCTTTTACATGTTGTTCAACTTGGGATTAACGTCATATATCATTGGGAACATGACAAACCTTGTAGTGCACTGGACCAGCCGCACCAGAAACTTTAGAGACACAGTAAGAGCAGCTACAGAATTTGCTTCAAGAAACCATTTGCCCCATCATATACAAGATCAAATGTTGTCACACTTGTGTTTGAGATTTAAGACAGAAGGATTGAAGCAACAAGAAGCACTAAATGGTCTGCCTAAGGCAATTCGTTCAAGCATTTCACACCATCTATTTTTCCCCATACTGCAGAAAGTCTACCTCTTCCAAGGAGTTTCTCATGACCTTCTTTTTCAACTGGTTTCAGAAATAGAAGCAGAATATTTCCCACCCAAGGAAGAAGTGATCCTGCAAAACGAGTCTCCAACAGACCTTTATGTACTAGTGTCAGGGGTAGTGGATATTATTCGCTACACTAACGGACGAGATCAAGTTATCAGTAAGGCAATTGGAGGAGATGCAGTTGGTGAGATAGGGGTTTTATACTACAGACCACAGCCTTTCACAGTTCGGACCAAGGAGCTTTCTCAAATATTAAGACTCAGCAGAACTTCCTTAATGAATGCCATACAAGCAACCCCAGGAGATGAACAAATTATAATGAACAATCTTTTCATGAAACTTAGGGGACAAGGCCTGGCCTCTGAATATGTCCATGAAATGCTTGATGGAACAAGAATAGGAGGTTGTACCAAAAATTCAAATGGAAATTCCGAAATGAAAGAAGGAGAATACAAAGATTTTGCAGACTTGGAAGACACTACTCATGATGCTGCAAAGGACAGTCATCAAGATATGATTGAAATTTTGCTCCAAAGAGACACAAATGCAAAGAGTCAAAATTCCCAACCACGGACTCCAAAAGTTCCAATAGAACAGCAAGAAAACAAGAGCATCTCTGACCTCTTAATGAGTGATGAAAATAGGAGGAGATCAGATGAATATAAAATAGACTTGGTGGCTAGGAATGATCTAACCAGAAGCAGAAGACATGATGGTCCCAGGCCCATCGAATTCTTGATAGAAAAAGTCTACCCTAACTCTTATTCGGGAAATACAAATGTCTCAGGTTATAGAGAAGTGGCAAAACACATTAAAAAAAGAGTTACAATCCACTTGATCTGTGAATACTGTAGTGCTTCACAGGGGCATGGGAAATTAATACTTTTACCTGATTCATTAGAAGAGCTGCTCAAGGTTGCTGGTCAAAAATTTGAAGGCTCCAAACCTACAAACATTGTTACTGCAGAAAATGCAGAGATAGATGACATAAGCATCATTCAAGACGGTGATCATCTCTTCCTTCTTTGCAGTGATAGCGAACATTTGAATTCATGA 2205 0.405 MSLSCAKNFFQRFWVDEFQMGSFAHSSFLSSDLLPSLGARINQENRLRRYVISPFNPWYRAWEMLLIILVIYSAWICPFEFAFLPYKQDALFIFDNTINGFFAIDIVMTFFVAYLDSHSYLLVDDHKKIAARYLSCWFIFDVCSTAPFQSISLLFTKHSGELGFKLLSMLRLWRLRRVSFLFARLEKDIRFNYFWTRCTKLISVTLFAVHCAGCFNYLLADRYPDSTRTWIGAVFPNYKELSLWDKYVTSIYWSIVTLTTTGYGDLHAENTGEMLFDIFYMLFNLGLTSYIIGNMTNLVVHWTSRTRNFRDTVRAATEFASRNHLPHHIQDQMLSHLCLRFKTEGLKQQEALNGLPKAIRSSISHHLFFPILQKVYLFQGVSHDLLFQLVSEIEAEYFPPKEEVILQNESPTDLYVLVSGVVDIIRYTNGRDQVISKAIGGDAVGEIGVLYYRPQPFTVRTKELSQILRLSRTSLMNAIQATPGDEQIIMNNLFMKLRGQGLASEYVHEMLDGTRIGGCTKNSNGNSEMKEGEYKDFADLEDTTHDAAKDSHQDMIEILLQRDTNAKSQNSQPRTPKVPIEQQENKSISDLLMSDENRRRSDEYKIDLVARNDLTRSRRHDGPRPIEFLIEKVYPNSYSGNTNVSGYREVAKHIKKRVTIHLICEYCSASQGHGKLILLPDSLEELLKVAGQKFEGSKPTNIVTAENAEIDDISIIQDGDHLFLLCSDSEHLNS 734
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g1249 734 Pfam KHA, dimerisation domain of potassium ion channel 656 724 IPR021789 -
Mibi06g1249 734 PRINTS EAG/ELK/ERG potassium channel family signature 291 300 IPR003938 GO:0005249|GO:0006813|GO:0016020
Mibi06g1249 734 PRINTS EAG/ELK/ERG potassium channel family signature 95 105 IPR003938 GO:0005249|GO:0006813|GO:0016020
Mibi06g1249 734 PRINTS EAG/ELK/ERG potassium channel family signature 247 264 IPR003938 GO:0005249|GO:0006813|GO:0016020
Mibi06g1249 734 PRINTS EAG/ELK/ERG potassium channel family signature 106 115 IPR003938 GO:0005249|GO:0006813|GO:0016020
Mibi06g1249 734 PRINTS EAG/ELK/ERG potassium channel family signature 72 79 IPR003938 GO:0005249|GO:0006813|GO:0016020
Mibi06g1249 734 PRINTS EAG/ELK/ERG potassium channel family signature 273 284 IPR003938 GO:0005249|GO:0006813|GO:0016020
Mibi06g1249 734 Gene3D Helix hairpin bin 301 367 - -
Mibi06g1249 734 FunFam Potassium channel KAT2 365 501 - -
Mibi06g1249 734 CDD CAP_ED 377 490 IPR000595 -
Mibi06g1249 734 Pfam Ion transport protein 60 306 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Mibi06g1249 734 SMART cnmp_10 377 494 IPR000595 -
Mibi06g1249 734 Gene3D - 60 300 - -
Mibi06g1249 734 ProSiteProfiles cAMP/cGMP binding motif profile. 377 496 IPR000595 -
Mibi06g1249 734 Pfam Cyclic nucleotide-binding domain 397 480 IPR000595 -
Mibi06g1249 734 Gene3D Jelly Rolls 370 503 IPR014710 -
Mibi06g1249 734 MobiDBLite consensus disorder prediction 563 590 - -
Mibi06g1249 734 ProSiteProfiles KHA domain profile. 657 734 IPR021789 -
Mibi06g1249 734 PANTHER POTASSIUM CHANNEL AKT1 25 500 IPR045319 GO:0005249|GO:0006813
Mibi06g1249 734 FunFam Potassium channel KAT3 61 301 - -
Mibi06g1249 734 SUPERFAMILY Voltage-gated potassium channels 54 299 - -
Mibi06g1249 734 SUPERFAMILY cAMP-binding domain-like 304 497 IPR018490 -
Mibi06g1249 734 MobiDBLite consensus disorder prediction 563 596 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g1249 Mibi-ChrMibi06 32669037 32672581 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi06g1249 1 724 Ion Channels AT5G46240 60.635 0.0 874
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi06g1249 06 32669037 32672581 Mibi06g1249 06 32669037 32672581 ECH