Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g1245 ATGAAGTCACAGCCTCCTCTTCCACTTCGCCGAACATCCCAACGATCAGAAGCAGCGACTCCTCAACCTCACTGTGTCGTAACTATGTCGAGGAGAAAGGTTAGAGAGCCTAAGGAGGAGAATGTCACTCTTGGCCCTGCTGTAAGGGAGGGTGAACATGTTTTCGGTGTAGCCCACATTTATGCATCATTTAACGACACCTTCATTCACGTGACTGATCTGTCTGGGAGAGAAACCCTTGTCCGCATCACTGGTGGAATGAAGGTAAAAGCTGACAGAGATGAGTCTTCCCCATACGCTGCTATGCTTGCTGCACAGGACGTGTCTTCTAGATGCAAGGAACTTGGCATCACTGCCCTTCACATCAAGCTCCGGGCCACTGGTGGAAACAAGACGAAAACACCTGGTCCTGGTGCTCAGTCTGCTCTCCGTGCCCTTGCTCGTTCTGGAATGAAAATCGGTCGTATAGAGGATGTGACTCCAATTCCATCTGATAGCACTCGCAGAAAGGGTGGTAGAAGAGGTAGAAGGCTTTAA 537 0.5009 MKSQPPLPLRRTSQRSEAATPQPHCVVTMSRRKVREPKEENVTLGPAVREGEHVFGVAHIYASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSSRCKELGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRIEDVTPIPSDSTRRKGGRRGRRL 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g1245 178 Gene3D Ribosomal protein S11 29 178 IPR036967 GO:0003735|GO:0005840|GO:0006412
Mibi06g1245 178 Hamap 30S ribosomal protein S11 [rpsK]. 10 175 IPR001971 GO:0003735|GO:0005840|GO:0006412
Mibi06g1245 178 SUPERFAMILY Translational machinery components 52 174 - -
Mibi06g1245 178 ProSitePatterns Ribosomal protein S11 signature. 143 165 IPR018102 -
Mibi06g1245 178 MobiDBLite consensus disorder prediction 157 178 - -
Mibi06g1245 178 PIRSF RPS11p_RPS11a_RPS14e_RPS11o 26 175 IPR001971 GO:0003735|GO:0005840|GO:0006412
Mibi06g1245 178 MobiDBLite consensus disorder prediction 1 22 - -
Mibi06g1245 178 Pfam Ribosomal protein S11 56 174 IPR001971 GO:0003735|GO:0005840|GO:0006412
Mibi06g1245 178 FunFam 40S ribosomal protein S14 29 178 - -
Mibi06g1245 178 PANTHER 40S RIBOSOMAL PROTEIN S14/30S RIBOSOMAL PROTEIN S11 31 173 IPR001971 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g1245 Mibi-ChrMibi06 32627770 32630164 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi06g1245 29 167 Cytoplasmic Ribosomal Protein Gene Family AT3G52580 90.647 2.93e-93 266