Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g1231 ATGTCTCCAAAGATCAGTTTGAGTATACTCATAGTCTTGTTCATTTCTATTTTAACTACTTTACCTTCAAATTATGCAGAATCAAGCTCACTGCTGGAAGTTGAAATTGAAGCTTTGAAAGCTTTTAAAACCTCTATCACTCATGACCCAAATGGAGCATTGGCAGATTGGGTTGACACAATCCATCATTGCAACTGGTCTGGCATTGCCTGTGACCAGTCTTCTCGACATGTTATCTCTCTCACTCAGTCCGGCCAAAAGCTCCAAGGTAAGATTTCACCATTCCTAGGCAATCTTTCAGGCCTCCAGCTTCTTGACTTGACCTCAAATTCATTTTCTGGTCACATTCCTCCTCAGCTCAGCTTTTGTTCCCAACTTTCTCAATTGTACCTTGTTGATAACTCTCTCAGTGGATCAATCCCACCTGAGCTAGGAAACTTGAAAGGTCTGCAATATTTGGATTTGGGTAGTAACAATCTTACTGGAAGCCTCCCAGAAAGCTTATTTAACTTAACCTCTATGCTTGGCATTTCTTTTAATTCTAACAATCTTAATGGTGAAATCCCTTCAAGTATTGGCAATTTGGTTAACGTTACACAAATTGCTGGATTTACTAATAAGTTTGTTGGGTCTATTCCTCCTTCCATAGGTAAGTTAAGGGCTTTACAATCTCTTGATTTTAGTCAAAACCAGTTGTCAGGAGAGATACCTAGAGAGATTGGGAATCTAGCAAACTTGGAATATCTTCTCCTATTTGAAAATTCCTTGGTTGGGAAAATCCCTTCTGAAATTGGTCGGTGCATGAATCTTGTGAACCTTGAACTATACACAAATCAGTTGTCTGGAAGCATTCCTTTTGAGCTAGGAAACTTAGTTCTTTTGGAAACATTAAGGTTATATGATAATAACTTCACTTCCACTATTCCTTCTTCCATTTTCCAGCTGAAATCATTAACCAACTTGGGTCTGTCAGAGAATCGGTTAGAGGGAATAATATCTCCTGAAATCGGAACTTTGAGATCACTTAAAGTTCTAACCCTGCCTTTAAATAAGTTCACTGGTCAAATTCCTTCATCAATCACAAACTTGACAAACTTAACATATTTATCAATGAGCCAGAATCTTTTTTCAGGTGAACTTCCTTCCAACATAGGATTGCTTCATAATTTGAAGTTTCTAGTCCTGAACTACAACCTTTTTCATGGTCATATCCCTCCTAGCATTACCAATTGTACAAGTATGGTGAACGCAAGTTTGAGCTTTAATTCGCTAGACGGGAACATTCCTGAAGGCTTTTCAAGGATGCCTAATCTTACTTTCTTGTCTCTAGCATCAAACAGAATGTCTGGTGAAATCCCAGATGATCTCTTCAACTGCTCAAATCTTCGAACTCTAAGTTTGGCTGAGAACAATTTCAGTGGGATTCTAAAACCAAATATCAAAAACCTGTTTAATGTCAAAACTCTTCAGCTGCATATAAATTCTTTCTCGGGGCCTATTCCACATGAGTTAGGGAATTTAAATCAGCTTGTGACATTAGCACTTTCTGATAATAGATTTTCTGGCCACATTCCTTTAGAGTTATCCAACCTCAGTCTTCTTCAGGGTCTTTCCTTGCAAGGAAATGAATTAGAAGGTACAATACCTAATCAATTATCTGAACTAAATCAACTAACCGTGCTTAAGCTACATCAGAACAAGCTGGTGGGTCAAATCCCAAAGGCTTTCTCCAAGCTTAAGATGCTTTCTCACTTAGACCTCCATGGGAACATGTTCAATGGATCAATTCCAAGTGAGTTGAGTCAACTCAGCCAGCTCTTAATGTTGGATTTGTCACAGAACCAATTGACAAGGTCGATTCCTGGGGATGTCATCTCATCTTTCAGAGACATGCAGCTATATCTCAACTTGTCTCATAACCACTTCACCGGAGCTATACCGGTAGAACTTGGTGTGATGGAAATGATACAAGTCATTGATGTTTCAAACAACAATCTATCTGGTGTCATTCCCAAGACACTTTCAGGGTGCAGGAATCTATTTGATCTTGATCTTTCAGGAAACAATGTCTCAGGTCCTATTCCATCGCAGGCTTTCAATAAAATGGACTTGCTTCAAAGCTTGAACCTTTCAAGGAACCATTTAGATGGAGGAATCCCCGAGACATTGTCAAAGCTTGAGCATCTTATTTCCTTGGATCTTTCTCATAATAACTTGGAGGGATCTATCTCTGAGAATTTCGCCAATCTCTCCAATCTAAAGCTTCTCAACCTTTCCTTCAACCAACTTGAAGGTCAAGTTCCATCAAGCGGAATATTCTCACATATAGATGCATCTGCTTTGATAGGAAACCCTTCTCTATGTGGAACCAAATTTCTGATGCCATGCAGGGAAACAAGAAAGAGATCTCATTCACTATCCAAGAAGAGCATATATATTATTGCCTCACTTGGATCTGTTGCCGTCCTCCTAATTTTGGTATTGGTGATTCTATTTCTCATACGACGTACCAGATCACGTGGTTCTAACAAGCTTGAGAATCATGAAGTACCAAACTTCACATCAGCCTTGACACTTGAAAGATTTGACAGAAAGGACCTAGAAAATGCTACTAGTTGTTTCAGCTCAGATAACATCATTGGAGCTAGCAATTTGAGCACTGTTTATGAGGGTCAATTGGGAGATGGCAAGATAGTGGCAATAAAAAAACTGAACTTGGACCATTTTTCTGCAAAATGTGACAAACTTTTCAAGACAGAGATAAACACCTTGAGCCAACTGAGGCACAGGAATTTGGTAAAGGTTCTGGGGTATGCTTGGGAGAGTGGGAAAATGAAGGCTCTAGTTTTAGAGTACATGCAGCATGGGAATTTGGATAGCATAATACATAATGAAGAAGGGATGGATCAAACTAGATGGAGATTATCTGAAAGGCTTAATGTTTTAATTTCTGTTGCTGATGCATTGGATTACTTGCACTCTGGTTATGATATTCCAATTGTGCATTGTGATTTAAAGCCTTCCAATATTCTGTTGGATGGAAATTGGTTGGCCCATGTGAGTGATTTTGGGACAGCCAGAATGCTTGGTCTCCATTTGCAAGATGGTGCTTCTTTGTCCTCATCAACAGCTTTCCAAGGCACTATTGGTTATTTGGCTCCAGAGCTAGCGTACATGAGGAAAGTAACAACCAAAGTTGATGTGTTCAGCTTTGGTATAGTAGTAATGGAGTTTCTAACAAGAAGAAGACCAACAGGATTCGAAGAAGATGACTTGCCCTTAAGTCTGCGAGAAATAGTGCAGAAAGCACTTGCAAATACTGGAACAAAGCAACATGTCCTTCAAGTTGTGGATCCTTTGCTCTTTGAGAAAGAGCTTCATCAAGATGTCTTAATGGAGCTTTTCAAGCTATCATTGAGTTGTACCCTCCCAGATCCTGAAGATAGACCTAATATGAAACAAGTTTTGCCTGTCTTGATTATGTTTAAGAACCAAATATCATAA 3504 0.3916 MSPKISLSILIVLFISILTTLPSNYAESSSLLEVEIEALKAFKTSITHDPNGALADWVDTIHHCNWSGIACDQSSRHVISLTQSGQKLQGKISPFLGNLSGLQLLDLTSNSFSGHIPPQLSFCSQLSQLYLVDNSLSGSIPPELGNLKGLQYLDLGSNNLTGSLPESLFNLTSMLGISFNSNNLNGEIPSSIGNLVNVTQIAGFTNKFVGSIPPSIGKLRALQSLDFSQNQLSGEIPREIGNLANLEYLLLFENSLVGKIPSEIGRCMNLVNLELYTNQLSGSIPFELGNLVLLETLRLYDNNFTSTIPSSIFQLKSLTNLGLSENRLEGIISPEIGTLRSLKVLTLPLNKFTGQIPSSITNLTNLTYLSMSQNLFSGELPSNIGLLHNLKFLVLNYNLFHGHIPPSITNCTSMVNASLSFNSLDGNIPEGFSRMPNLTFLSLASNRMSGEIPDDLFNCSNLRTLSLAENNFSGILKPNIKNLFNVKTLQLHINSFSGPIPHELGNLNQLVTLALSDNRFSGHIPLELSNLSLLQGLSLQGNELEGTIPNQLSELNQLTVLKLHQNKLVGQIPKAFSKLKMLSHLDLHGNMFNGSIPSELSQLSQLLMLDLSQNQLTRSIPGDVISSFRDMQLYLNLSHNHFTGAIPVELGVMEMIQVIDVSNNNLSGVIPKTLSGCRNLFDLDLSGNNVSGPIPSQAFNKMDLLQSLNLSRNHLDGGIPETLSKLEHLISLDLSHNNLEGSISENFANLSNLKLLNLSFNQLEGQVPSSGIFSHIDASALIGNPSLCGTKFLMPCRETRKRSHSLSKKSIYIIASLGSVAVLLILVLVILFLIRRTRSRGSNKLENHEVPNFTSALTLERFDRKDLENATSCFSSDNIIGASNLSTVYEGQLGDGKIVAIKKLNLDHFSAKCDKLFKTEINTLSQLRHRNLVKVLGYAWESGKMKALVLEYMQHGNLDSIIHNEEGMDQTRWRLSERLNVLISVADALDYLHSGYDIPIVHCDLKPSNILLDGNWLAHVSDFGTARMLGLHLQDGASLSSSTAFQGTIGYLAPELAYMRKVTTKVDVFSFGIVVMEFLTRRRPTGFEEDDLPLSLREIVQKALANTGTKQHVLQVVDPLLFEKELHQDVLMELFKLSLSCTLPDPEDRPNMKQVLPVLIMFKNQIS 1167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g1231 1167 Gene3D Ribonuclease Inhibitor 32 191 IPR032675 -
Mibi06g1231 1167 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 419 1156 - -
Mibi06g1231 1167 ProSiteProfiles Protein kinase domain profile. 874 1162 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi06g1231 1167 Pfam Leucine rich repeat N-terminal domain 35 72 IPR013210 -
Mibi06g1231 1167 CDD STKc_IRAK 880 1159 - -
Mibi06g1231 1167 SUPERFAMILY L domain-like 34 305 - -
Mibi06g1231 1167 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 627 800 - -
Mibi06g1231 1167 Gene3D Ribonuclease Inhibitor 343 416 IPR032675 -
Mibi06g1231 1167 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1000 1012 IPR008271 GO:0004672|GO:0006468
Mibi06g1231 1167 SMART LRR_typ_2 363 386 IPR003591 -
Mibi06g1231 1167 SMART LRR_typ_2 291 315 IPR003591 -
Mibi06g1231 1167 SMART LRR_typ_2 579 602 IPR003591 -
Mibi06g1231 1167 SMART LRR_typ_2 219 242 IPR003591 -
Mibi06g1231 1167 SMART LRR_typ_2 726 749 IPR003591 -
Mibi06g1231 1167 SMART LRR_typ_2 435 459 IPR003591 -
Mibi06g1231 1167 SMART LRR_typ_2 147 171 IPR003591 -
Mibi06g1231 1167 SMART LRR_typ_2 653 676 IPR003591 -
Mibi06g1231 1167 SMART LRR_typ_2 750 775 IPR003591 -
Mibi06g1231 1167 SMART LRR_typ_2 555 578 IPR003591 -
Mibi06g1231 1167 SMART LRR_typ_2 387 411 IPR003591 -
Mibi06g1231 1167 SMART LRR_typ_2 603 627 IPR003591 -
Mibi06g1231 1167 SMART LRR_typ_2 507 531 IPR003591 -
Mibi06g1231 1167 SMART LRR_typ_2 99 123 IPR003591 -
Mibi06g1231 1167 SMART LRR_typ_2 702 725 IPR003591 -
Mibi06g1231 1167 SMART LRR_typ_2 243 267 IPR003591 -
Mibi06g1231 1167 SUPERFAMILY RNI-like 350 765 - -
Mibi06g1231 1167 Gene3D Transferase(Phosphotransferase) domain 1 953 1166 - -
Mibi06g1231 1167 Pfam Leucine rich repeat 657 715 IPR001611 GO:0005515
Mibi06g1231 1167 Pfam Leucine rich repeat 534 591 IPR001611 GO:0005515
Mibi06g1231 1167 Gene3D Ribonuclease Inhibitor 701 796 IPR032675 -
Mibi06g1231 1167 Gene3D Ribonuclease Inhibitor 417 700 IPR032675 -
Mibi06g1231 1167 Gene3D Ribonuclease Inhibitor 204 342 IPR032675 -
Mibi06g1231 1167 Pfam Protein kinase domain 876 1156 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi06g1231 1167 SUPERFAMILY L domain-like 602 691 - -
Mibi06g1231 1167 Gene3D Phosphorylase Kinase; domain 1 835 952 - -
Mibi06g1231 1167 SMART serkin_6 874 1159 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi06g1231 1167 PRINTS Leucine-rich repeat signature 729 742 - -
Mibi06g1231 1167 PRINTS Leucine-rich repeat signature 750 763 - -
Mibi06g1231 1167 SUPERFAMILY Protein kinase-like (PK-like) 854 1161 IPR011009 -
Mibi06g1231 1167 FunFam LRR receptor-like serine/threonine-protein kinase FLS2 32 186 - -
Mibi06g1231 1167 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 386 626 - -
Mibi06g1231 1167 FunFam Probable leucine-rich repeat receptor-like protein kinase At5g63930 187 286 - -
Mibi06g1231 1167 FunFam LRR receptor-like serine/threonine-protein kinase FLS2 835 952 - -
Mibi06g1231 1167 Pfam Leucine Rich Repeat 150 171 IPR001611 GO:0005515
Mibi06g1231 1167 Pfam Leucine Rich Repeat 728 750 IPR001611 GO:0005515
Mibi06g1231 1167 SMART LRR_sd22_2 603 624 - -
Mibi06g1231 1167 SMART LRR_sd22_2 726 749 - -
Mibi06g1231 1167 SMART LRR_sd22_2 147 173 - -
Mibi06g1231 1167 SMART LRR_sd22_2 219 245 - -
Mibi06g1231 1167 SMART LRR_sd22_2 363 386 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g1231 Mibi-ChrMibi06 32524341 32528589 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi06g1231 32 1165 Receptor kinase-like Gene Family AT5G46330 52.797 0.0 1107
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Mibi06g1231 Pkinase 3.8e-41 CL0016