Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g1223 ATGTCTGATGAAGCTAGTAAGGAATTCTATTACCAGAGTCTTTACTTAGGCCATAATAACCAGCAATCCACAGGTGGATCTGCCATGTTTTGTGAGAAAAGCTTCTCTGATTCCTTTAACAATATTCATGGCCCTTCATCATCATCTTCAGGCTTTGATGATGCTCCATACATGAGCTTCACAGAATGCCTACAAGGAGGCCTCGACTATAACTCTCTTATCACTTCCTTTGGCCTCTCTCCTTCCTCCTCCGAGGTTTTCTCTTCTGTTGAAGGCAATTATAATAATAACAACAACAATCATCAGAAGCCATCTTCAGAAACTCCAGGAGGTGGTGAAACGCCAGTGACCCAGAATTCATCCATCTCTAATTCATCTTCTTCAGAAGCAGGAGCCGAAGAAGAAGACTCATCAGGAAAGAGCAAGAAAGATAATAGTGATGGGGTCAAAGCATCAGAAGAAGAAAAATCTAACAACAAGAAAGGGAACAAAGGGAGGAAGAAAGGAGAGAAGAAGCAAAAGGAGCCCAGGTTCGCGTTCATGACCAAAAGCGAAGTCGATCACCTTGAAGATGGTTATAGATGGAGAAAATATGGACAGAAAGCCGTCAAGAATAGCCCTTACCCAAGAAGCTACTATAGGTGCACAACACAGAAATGCACAGTGAAGAAACGCGTGGAGAGGTCATATGAAGACCCAACCACTGTGATAACAACCTATGAGGGTCAACACAACCATCCTGTCCCCACTTCTCTCCGAGGAAATGCGGCCGCCATGTTCACATCACCTTCTTCCCTCTTCTCTCCACCGCCACAACACTCTCTTCCCTCCTCCCTCTCCCACCACGATCTCTTCCTCCACCACCACCTCTTCAACGCCGCCGGCCCTGGTTATAACAATATCATTCACACTACCAGTAACAGTAATAATGCTTCTTCTAATTCTCTTGTTCTTCATCATCATCATCATCATCAGCAGCAACAGCAGTATCATAACCCTCATGATGACTATGGCCTTCTTCAGGATATTCTCCCTTCCATGTTCCTCAAACAAGACCATAATCCCTAG 1068 0.4457 MSDEASKEFYYQSLYLGHNNQQSTGGSAMFCEKSFSDSFNNIHGPSSSSSGFDDAPYMSFTECLQGGLDYNSLITSFGLSPSSSEVFSSVEGNYNNNNNNHQKPSSETPGGGETPVTQNSSISNSSSSEAGAEEEDSSGKSKKDNSDGVKASEEEKSNNKKGNKGRKKGEKKQKEPRFAFMTKSEVDHLEDGYRWRKYGQKAVKNSPYPRSYYRCTTQKCTVKKRVERSYEDPTTVITTYEGQHNHPVPTSLRGNAAAMFTSPSSLFSPPPQHSLPSSLSHHDLFLHHHLFNAAGPGYNNIIHTTSNSNNASSNSLVLHHHHHHQQQQQYHNPHDDYGLLQDILPSMFLKQDHNP 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g1223 355 MobiDBLite consensus disorder prediction 85 183 - -
Mibi06g1223 355 Pfam WRKY DNA -binding domain 190 247 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mibi06g1223 355 ProSiteProfiles WRKY domain profile. 184 249 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mibi06g1223 355 SMART WRKY_cls 189 248 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mibi06g1223 355 MobiDBLite consensus disorder prediction 312 332 - -
Mibi06g1223 355 FunFam WRKY transcription factor 57 175 249 - -
Mibi06g1223 355 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 90 316 IPR044810 GO:0003700
Mibi06g1223 355 SUPERFAMILY WRKY DNA-binding domain 181 249 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mibi06g1223 355 MobiDBLite consensus disorder prediction 85 132 - -
Mibi06g1223 355 Gene3D WRKY domain 174 250 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mibi06g1223 355 MobiDBLite consensus disorder prediction 133 161 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g1223 Mibi-ChrMibi06 32452838 32454299 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi06g1223 43 352 WRKY Transcription Factor Family AT4G18170 46.395 5.58e-70 220
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Mibi06g1223 WRKY 2.1e-25 CL0274