Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g1211 ATGAAAGCAGCAGAAAAGGGCTATGCAATGAAGCAGTCTTTCGACATTTCAGCTTCTGGCCCAACTAAAATTCCATCTATAAATATTCCTAAAGAAGTGGGGCGCAATGCCTGGGAGGTTTTGTGTGGATCTGATGCCTACCATACCTCATCCGATGCTAGCCTTTTTTCTTGCTCATTACCCGTTCTGCCTCATGAAAAGTTGAACTTGAACGACACTGAAAATGAATATCAGTCTCTGGATGACATTTCATCTGGCTTTAAAAAGCTCCACCAAGGTTTAGAGGTTAATGATTCACTTGAAGGTGCAAATATTCATGCACTTGGAACAACGCTTCCAGATGATGAGGAAGAGCTTTTAGCTGGCATAGAAGATGATCTTGACCTGAGTGGTTTGCCTGGTTCCCTGGAGGACTTGGAAGATTATGATCTTTTTGGTAGCGGTGGAGGTATGGAACTGGAAATTGATCCTCAGGAAAGTCTTACATTGGGCATTTCAAAATTAGGTTTCTCTGATAGTACAATTGGCAATGGCTTGCCCCATTATTCTTTTCCTAATGGTGTCGGAACTGTTGCTGGGGAACATCCCTATGGGGAGCATCCTTCTCGAACATTATTTGTCCGTAATATTAACAGTAATGTGGAGGATTCGGAATTGAAAGCCCTGTTTGAGCAATATGGTGATATTAGGACCCTCTATACTGCATGTAAACATCGGGGGTTTGTAATGATATCCTACTATGACATCCGTGCTGCTCGAACAGCTATGCGTGCATTACAAAACAAACCACTGCGGCGGAGGAAACTTGACATTCATTTCTCAATACCAAAGGATAACCCAACAGACAAGGATATGAATCAAGGAACTTTGGTGGCTTTTAATTTGGATTCATCTGTTTCAAATGAATACCTCCGACAAATATTTGGGGCTTATGGCGAGGTCAAAGAGATAAGGGAAACTCCTCACAAGAAGAATCATAAATTTGTTGAATTTTATGATGTCAGAGCTGCAGAAGCTGCACTCAAAGGATTGAACAGGTGTGAGATAGCGGGTAAACGTATAAAGCTGGAACCTAGTCGTCCTGGTGGAGCTCGTCGAAATTTGATTCTCCAACTAAATCATGATCAAGATGAATCTCAGAATTTCCGACATCAAGTGGGTTCACCTGTGGCCAACTCTCCACCGGGTAACTGGTTGCAGTTTAGCAGCCCCATTGAACATAAGACAATGCAACCTCTCAGTAATTCTCCGGGCTCTAGGATTATGAGCCCAACAACTGGCACCCATTTACCAGGATTAGCTTCAATCTTGCAACCTCAAGGATCTAACTCTATAAAGGGTGCAGCTATTGGTAAGGACCTAGGAAGGAGTATTCATGGAGACCACATGTTTAGTAATAGTAATTCATCACATGGAGCTACATTTCAATCTCACTCACTCCCAGAACCAACATTTGGTCAATATCATGGAGCTTTGTCCTCTTTTGGTCAATCAACTTCAAATGGATCTTCTGTGGAAACCTTGTCTGGGCCTCAGTTTCTTTGGGGAAATTCAAGCTTATACTCTGAGCACACCAAACCTTCACCTTGGTCTAGACCTTCTGTGGGGCCTCCATTCACATCGAATGGAAAGGGTCATGGCTTCCCTTACTCTGGTCAGAATGGCTCCTTTATTGGATCGTCCCAGCATCATCTTCATCATCATGTAGGCTCTGCTCCATCAGGTGTTCCATTTGAGAGGCGCCTTGGTTTTCTTCCTGAATCACCCGAAACCTCATTTATGAATCATGTTGGTTATGGAGGCATAAATGTGGCACACAATGATGGAAACTACATGGTGAACATGGGTGCATCTGTTAATGCTGGCATTACAATGCCAAGGAATGTGTCTGAAAATGTTCAATCAAACTTGAGAATGAGATCTTCTCCAAGGCTTAGCCCTGTGTTTCTGGGTAATGGTCCTTACCCGGGGCTGCCACCCACTGCCCTGGATGGTTTGACTGATCGTGGAAGGGGTAGACGGCTAGAGAACAATGGTAGCCAACTTGATAGCAAGAAGCAGTTTTTGCTTGACTTGGATAAGATTAAATGTGGTGAAGATGCAAGGACTACTTTAATGATAAAGAATATCCCAAATAAGTACACTTCAAAAATGTTGCTAGCTGCCATTGACGAAAATCACAAGGGCACCTATGATTTCCTTTATCTGCCTATTGATTTTAAGAATAAGTGTAACGTGGGTTATGCATTTATCAACATGTTGTCACCCTCTCTTATCATTCCATTTTACGAGACATTCAATGGAAAGAAGTGGGAGAAGTTTAATAGTGAGAAAGTGGCTTCTTTGGCATATGCTCGAATCCAAGGAAAAGTTGCCCTTGTAAGTCACTTCCAGAATTCAAGTTTGATGAATGAAGACAAGCGATGCCGACCTATTCTCTTCCACTCGGAGGGTCCTGAAGTGGGTGATCAGATCGTTCAAGAGCATCTTCCCTCGAACAATCTCAACATCCAGGTCATCAGGCCTAGTGATTCACTTTTGAATGACTCTCTTGGAAGCTCCCCAAATGATAACCCTCCTGTGAACTTGGAGACCAGTTAA 2601 0.4295 MKAAEKGYAMKQSFDISASGPTKIPSINIPKEVGRNAWEVLCGSDAYHTSSDASLFSCSLPVLPHEKLNLNDTENEYQSLDDISSGFKKLHQGLEVNDSLEGANIHALGTTLPDDEEELLAGIEDDLDLSGLPGSLEDLEDYDLFGSGGGMELEIDPQESLTLGISKLGFSDSTIGNGLPHYSFPNGVGTVAGEHPYGEHPSRTLFVRNINSNVEDSELKALFEQYGDIRTLYTACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHFSIPKDNPTDKDMNQGTLVAFNLDSSVSNEYLRQIFGAYGEVKEIRETPHKKNHKFVEFYDVRAAEAALKGLNRCEIAGKRIKLEPSRPGGARRNLILQLNHDQDESQNFRHQVGSPVANSPPGNWLQFSSPIEHKTMQPLSNSPGSRIMSPTTGTHLPGLASILQPQGSNSIKGAAIGKDLGRSIHGDHMFSNSNSSHGATFQSHSLPEPTFGQYHGALSSFGQSTSNGSSVETLSGPQFLWGNSSLYSEHTKPSPWSRPSVGPPFTSNGKGHGFPYSGQNGSFIGSSQHHLHHHVGSAPSGVPFERRLGFLPESPETSFMNHVGYGGINVAHNDGNYMVNMGASVNAGITMPRNVSENVQSNLRMRSSPRLSPVFLGNGPYPGLPPTALDGLTDRGRGRRLENNGSQLDSKKQFLLDLDKIKCGEDARTTLMIKNIPNKYTSKMLLAAIDENHKGTYDFLYLPIDFKNKCNVGYAFINMLSPSLIIPFYETFNGKKWEKFNSEKVASLAYARIQGKVALVSHFQNSSLMNEDKRCRPILFHSEGPEVGDQIVQEHLPSNNLNIQVIRPSDSLLNDSLGSSPNDNPPVNLETS 866
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g1211 866 FunFam MEI2-like protein 5 isoform 2 192 286 - -
Mibi06g1211 866 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 288 361 IPR000504 GO:0003723
Mibi06g1211 866 CDD RRM3_MEI2_like 705 790 IPR034454 -
Mibi06g1211 866 CDD RRM1_MEI2_like 202 278 IPR034453 -
Mibi06g1211 866 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 203 276 IPR000504 GO:0003723
Mibi06g1211 866 Gene3D - 289 383 IPR012677 -
Mibi06g1211 866 MobiDBLite consensus disorder prediction 525 573 - -
Mibi06g1211 866 SUPERFAMILY RNA-binding domain, RBD 704 788 IPR035979 GO:0003676
Mibi06g1211 866 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 205 269 IPR000504 GO:0003723
Mibi06g1211 866 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 294 355 IPR000504 GO:0003723
Mibi06g1211 866 FunFam Protein MEI2-like 1 287 382 - -
Mibi06g1211 866 SMART rrm1_1 289 357 IPR000504 GO:0003723
Mibi06g1211 866 SMART rrm1_1 204 272 IPR000504 GO:0003723
Mibi06g1211 866 SMART rrm1_1 704 780 IPR000504 GO:0003723
Mibi06g1211 866 Pfam RNA recognition motif 2 702 798 IPR007201 -
Mibi06g1211 866 CDD RRM2_MEI2_like 287 357 - -
Mibi06g1211 866 Gene3D - 192 288 IPR012677 -
Mibi06g1211 866 PANTHER RNA RECOGNITION MOTIF-CONTAINING 186 842 - -
Mibi06g1211 866 SUPERFAMILY RNA-binding domain, RBD 200 363 IPR035979 GO:0003676
Mibi06g1211 866 MobiDBLite consensus disorder prediction 546 561 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g1211 Mibi-ChrMibi06 32300607 32310420 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi06g1211 198 394 Eukaryotic Initiation Factors Gene Family AT1G71770 25.792 1.69e-06 50.1