Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mibi06g1210 | ATGAGCTTCTCATCTTCAGCTACGAGCAACATGAAGGCCATCGTTAACAGAGACAAGGCGATTGCTCAGTACAGTGCCGATGCTGAGATTTTCGCGGAGTTTGGGCGTTCTAGCGTCACAGGAAAATCTTTTGATTACTCGAAGTCGGTGCTTTACCCTCCGAAATCGGTGTCGGAAGAGAAAATGACGAATTATTTATCAAATATCCAGAGAGGGGGTCTCATTCAGCCATTTGGTTGTATGATTGCAATTGAGGAAGCCACTTTCAAGATCATAAGCTATAGTGAGAATTGCTTTGAATTGTTGGGTTTAGAAAGGCGTTTTGATTCGAAACAACCGATGAATCTGATCGGAGTTGATGTTAGAACATTGTTCACGTTTTCTTCTGAGGTTTCCTTTGTAAAAGCTGTGGCGACAGAGGAAATATCGCTTTTGAACCCTATTTGGGTGTATTCAAGGACAACTCAGAAACCATTCTATGCAATATTGCACAGGATTGATGTGGGGATTGTGATTGATTTAGAACCTGCTCGTACCAATGATCATGCTCTGTCACTCGCTGGAGCAGTGCAGTCACAGAAACTTGCAGTTCGAGCAATTTCAAGACTGCAATCTCTTCCTGGGGGAGATATTGGTGTGTTGTGTGATACAGTTGTTGAAGAAGTCCAGAAGCTTACTGGATATGATAGGGTTATGGTATATAAGTTCCATGAGGATGATCATGGTGAAGTTGTATCAGAAATTAGGAGGTCAGACTTAGAGCCTTATTTGGGTTTACATTACCCTTCCACTGATATTCCTCAAGCTGCTCGCTTCTTATTTAAGCAAAACCGTGTGAGGATGATATGTGATTGCCATGCAAATCCAGTTAAGGTCATACAGTGTCAACAATTAAGGAAACCACTTTGCCTGGTCAATTCAACCCTTAGGTCACCACATGATTGCCACGCACAATATATGGCTAATATGGGCTCTGTTGCTTCTTTGGTGATAGCAGTTATAGTCAATGGAAATGATGCAACAAAGCTTTGGGGTTTGCTAGTTTGCCATCACACTTCACCACGTCACGTGCCTTTCCCTCTTCGCTATGCTTGTGAGTTCCTCACGCAGGCTTTTGGACTGCAGCTTTATATGGAGATGCTACGAGCAGCACAAATGGCAAAGAGAATGCTTAGGACACAGACCTTACTATGTGATATGCTTCTCCGTGATGCCCCATTGGGTATTGTCACTCAGTCTCCAAGTATCATAGATCTTGTGAAGTGTGATGGGGCAGCATTGTATTATGATGGAGATTGTTGGCTATTGGGCACCACCCCAACTGAGTCACAGGTAAAAGACATTGCAGAATGGCTACTCAGTAATCATGGCGACTCTACTGGTTTGAGCACTGATAGTTTGGCTGAAGCTGGTTATCCAGGAGCTGCTTTACTGGGGAATGCAGTTTGTGGCATGGCAACAGCAAGAATAAATATGAGAGATTTTTTATTCTGGTTCAGATCGCACGCTGCCAAGGAAGTTCAATGGGGAGGAGCCAAGTACCATCAAAAGGATAAAGATGATGGAGGAAAATTGAATCCAAGATCATCATTTGAAGCTTTTCTTGAAGTAAACAAAAGCAAAAGCTTGCCCTGGGACGTGTCAGAAATTAATATTATTCACTCATTGCAGCTTATAGTGCGAGAATCCTTCCAAAACACACAGAACTTTGGTCCTAAGACACTTTGTTGGGCTCAGCGTAGTGATACTACAATGGCTGGGATGGATGAACTCAGTTCGGTGGCATTTGAGATGGTTAGACTAATTGAGACAGCAACAGTTCCAATTTTTGAAGTAAATTCGGCTGGTCTAATCAATGGATGGGATGCAAAAATTGCAGAGTTAACTGGGCTGCAGGCTTGTGAAGCTATGGGGAAATCCCTAGTAAATGAAATAGTCCATGCTGACTCACATGAAACTGTTGAGAATATTTTAAGCAGAGCCTTGCAAGGTCAGGAGGACAAAAACGTTGAGTTGAAACTAAAGTATTTTGGGCTTCAACAACAAAAGTCAGTTATATATATAAGGGCTAATGCTTGCACAAGTAGGGATCGCAGAAATGCTATGGTTGGGGTATGCATTGTGGGTCAAGATATCACTTATGAAAAAGTTTTCCAAAACAAATTTATCAAGTTGGAAGGTGATTACAAGGCTATTATCCAGAGTCTCAATCCACTGATTCCACCTATATTTGCTTCTGATGAGAATGCCTGCTGCTCTAAATGGAATGCAGCCATGGAAAGGTTGACAGGTTGGAAGAGAGATGAAGTTATAGGAAAACTTCTACCAGGGGAAATATTTGGGGTTCTATGTAAATTTAAAGGCCAAGACACATTGACCAACTTTATGATTTCATTGTATAAAGGAATCAGTGGTCAAGATTCTGAGAAATTCTCTTTTGGATTTTATAATAGAAAAGGAGAATTTGTGGAGGTTTTTTTAGCAGCAAACAAGAGGAATGATGCATGTGGGAATACAATTGGCAGTTTCTGCTTCTTGCAGATTGTATCATCAGACCCGAATCCACGCTTAGAAGGACAGAAGTCAGAGGGTAAGGCAAACTTTTCTAAATTCAAGGAGCTGGCATATATACTTCAAGAGATGAAGAGTCCTTTGAATGGTATGCGCTTCACACACCAACTTTTGGAGAATACGGCTGTCTCAGAAAATCAAAAACAGTTTCTTGATACTAGCAATGCGTGTGAGAGGCAGATTGTGTCCATTATTGAGAACACAGATTTAGGAAGCATTGACGAGGGCACCATGAAGCTAAACGATGAAGAATTTCTTATGGGAAATATATTGGATGCTATTGTAAGTCAGGTCATGATCTCGATAAGAGGGAAAAACTTGCAGCTGTTTCACGAAATTCCTGATGATATCAAGACACGTACCCTATATGGTGATCAAATTAGGCTTCAGGTGGTCCTGTCTGACATTTTGCGTAATGTGGTGAATCACACACCATCTCCTAAAGGCTGGATAGAAATTAAGATTTCACCTGGTTTGAAGATAATGCAAGATGGCAACGAGTTTATCCATCTCCAGTTCAGAATGACACATGCAGGTCAAGGCCTTCCTTCTGCTGTTCTTCAGGATATGTTTGAAGCAGAGGATCAATGGACTACACAGGAAGGTTTAGGGCTATATATGTCCCGGAAAATCCTCAGTAGGATGAAGGGTCGTGTTCACTATGTAAGAGAACATAACAAGTGCTACTTCCTCATTGATCTTAAACTTAGAGCAAGAAAAATAAAGGCAGAGGAATTGGCTACCCGAGACAGGCATGTCTAA | 3333 | 0.4155 | MSFSSSATSNMKAIVNRDKAIAQYSADAEIFAEFGRSSVTGKSFDYSKSVLYPPKSVSEEKMTNYLSNIQRGGLIQPFGCMIAIEEATFKIISYSENCFELLGLERRFDSKQPMNLIGVDVRTLFTFSSEVSFVKAVATEEISLLNPIWVYSRTTQKPFYAILHRIDVGIVIDLEPARTNDHALSLAGAVQSQKLAVRAISRLQSLPGGDIGVLCDTVVEEVQKLTGYDRVMVYKFHEDDHGEVVSEIRRSDLEPYLGLHYPSTDIPQAARFLFKQNRVRMICDCHANPVKVIQCQQLRKPLCLVNSTLRSPHDCHAQYMANMGSVASLVIAVIVNGNDATKLWGLLVCHHTSPRHVPFPLRYACEFLTQAFGLQLYMEMLRAAQMAKRMLRTQTLLCDMLLRDAPLGIVTQSPSIIDLVKCDGAALYYDGDCWLLGTTPTESQVKDIAEWLLSNHGDSTGLSTDSLAEAGYPGAALLGNAVCGMATARINMRDFLFWFRSHAAKEVQWGGAKYHQKDKDDGGKLNPRSSFEAFLEVNKSKSLPWDVSEINIIHSLQLIVRESFQNTQNFGPKTLCWAQRSDTTMAGMDELSSVAFEMVRLIETATVPIFEVNSAGLINGWDAKIAELTGLQACEAMGKSLVNEIVHADSHETVENILSRALQGQEDKNVELKLKYFGLQQQKSVIYIRANACTSRDRRNAMVGVCIVGQDITYEKVFQNKFIKLEGDYKAIIQSLNPLIPPIFASDENACCSKWNAAMERLTGWKRDEVIGKLLPGEIFGVLCKFKGQDTLTNFMISLYKGISGQDSEKFSFGFYNRKGEFVEVFLAANKRNDACGNTIGSFCFLQIVSSDPNPRLEGQKSEGKANFSKFKELAYILQEMKSPLNGMRFTHQLLENTAVSENQKQFLDTSNACERQIVSIIENTDLGSIDEGTMKLNDEEFLMGNILDAIVSQVMISIRGKNLQLFHEIPDDIKTRTLYGDQIRLQVVLSDILRNVVNHTPSPKGWIEIKISPGLKIMQDGNEFIHLQFRMTHAGQGLPSAVLQDMFEAEDQWTTQEGLGLYMSRKILSRMKGRVHYVREHNKCYFLIDLKLRARKIKAEELATRDRHV | 1110 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mibi06g1210 | 1110 | ProSiteProfiles | Histidine kinase domain profile. | 876 | 1095 | IPR005467 | - | |
Mibi06g1210 | 1110 | ProSiteProfiles | PAS repeat profile. | 594 | 665 | IPR000014 | - | |
Mibi06g1210 | 1110 | SUPERFAMILY | PYP-like sensor domain (PAS domain) | 600 | 708 | IPR035965 | - | |
Mibi06g1210 | 1110 | Pfam | GAF domain | 210 | 379 | IPR003018 | GO:0005515 | |
Mibi06g1210 | 1110 | SMART | gaf_1 | 210 | 390 | IPR003018 | GO:0005515 | |
Mibi06g1210 | 1110 | PIRSF | Phytochrome_conventional | 1 | 1102 | IPR012129 | GO:0006355|GO:0009585|GO:0009881|GO:0017006|GO:0042803 | |
Mibi06g1210 | 1110 | Gene3D | - | 384 | 557 | IPR043150 | - | |
Mibi06g1210 | 1110 | TIGRFAM | sensory_box: PAS domain S-box protein | 601 | 719 | IPR000014 | - | |
Mibi06g1210 | 1110 | ProSiteProfiles | Phytochrome chromophore attachment site domain profile. | 210 | 370 | IPR016132 | - | |
Mibi06g1210 | 1110 | CDD | PAS | 739 | 847 | IPR000014 | - | |
Mibi06g1210 | 1110 | SUPERFAMILY | ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase | 945 | 1091 | IPR036890 | - | |
Mibi06g1210 | 1110 | FunFam | Phytochrome | 384 | 516 | - | - | |
Mibi06g1210 | 1110 | Gene3D | - | 932 | 1098 | IPR036890 | - | |
Mibi06g1210 | 1110 | PRINTS | Phytochrome signature | 125 | 147 | IPR001294 | GO:0006355|GO:0009584 | |
Mibi06g1210 | 1110 | PRINTS | Phytochrome signature | 494 | 513 | IPR001294 | GO:0006355|GO:0009584 | |
Mibi06g1210 | 1110 | PRINTS | Phytochrome signature | 527 | 545 | IPR001294 | GO:0006355|GO:0009584 | |
Mibi06g1210 | 1110 | PRINTS | Phytochrome signature | 597 | 613 | IPR001294 | GO:0006355|GO:0009584 | |
Mibi06g1210 | 1110 | PRINTS | Phytochrome signature | 710 | 730 | IPR001294 | GO:0006355|GO:0009584 | |
Mibi06g1210 | 1110 | PRINTS | Phytochrome signature | 616 | 631 | IPR001294 | GO:0006355|GO:0009584 | |
Mibi06g1210 | 1110 | PRINTS | Phytochrome signature | 225 | 244 | IPR001294 | GO:0006355|GO:0009584 | |
Mibi06g1210 | 1110 | PRINTS | Phytochrome signature | 409 | 429 | IPR001294 | GO:0006355|GO:0009584 | |
Mibi06g1210 | 1110 | PRINTS | Phytochrome signature | 690 | 707 | IPR001294 | GO:0006355|GO:0009584 | |
Mibi06g1210 | 1110 | PRINTS | Phytochrome signature | 310 | 331 | IPR001294 | GO:0006355|GO:0009584 | |
Mibi06g1210 | 1110 | SMART | pas_2 | 596 | 663 | IPR000014 | - | |
Mibi06g1210 | 1110 | SMART | pas_2 | 727 | 797 | IPR000014 | - | |
Mibi06g1210 | 1110 | SMART | HKATPase_4 | 981 | 1095 | IPR003594 | - | |
Mibi06g1210 | 1110 | SUPERFAMILY | PYP-like sensor domain (PAS domain) | 742 | 844 | IPR035965 | - | |
Mibi06g1210 | 1110 | Gene3D | PAS domain | 68 | 313 | - | - | |
Mibi06g1210 | 1110 | FunFam | Phytochrome | 741 | 849 | - | - | |
Mibi06g1210 | 1110 | Pfam | His Kinase A (phospho-acceptor) domain | 873 | 933 | IPR003661 | GO:0000155|GO:0007165 | |
Mibi06g1210 | 1110 | Gene3D | PAS domain | 596 | 716 | - | - | |
Mibi06g1210 | 1110 | CDD | HATPase_Phy-like | 980 | 1093 | IPR044767 | - | |
Mibi06g1210 | 1110 | ProSiteProfiles | PAS repeat profile. | 728 | 773 | IPR000014 | - | |
Mibi06g1210 | 1110 | Pfam | PAS fold | 728 | 847 | IPR013767 | GO:0006355 | |
Mibi06g1210 | 1110 | Pfam | PAS fold | 597 | 712 | IPR013767 | GO:0006355 | |
Mibi06g1210 | 1110 | SUPERFAMILY | GAF domain-like | 388 | 566 | - | - | |
Mibi06g1210 | 1110 | FunFam | Phytochrome | 590 | 722 | - | - | |
Mibi06g1210 | 1110 | Gene3D | - | 191 | 540 | IPR029016 | - | |
Mibi06g1210 | 1110 | SUPERFAMILY | PYP-like sensor domain (PAS domain) | 69 | 180 | IPR035965 | - | |
Mibi06g1210 | 1110 | Pfam | PAS fold | 65 | 177 | IPR013654 | GO:0006355 | |
Mibi06g1210 | 1110 | PANTHER | OS08G0260000 PROTEIN | 61 | 930 | - | - | |
Mibi06g1210 | 1110 | CDD | HisKA | 874 | 924 | IPR003661 | GO:0000155|GO:0007165 | |
Mibi06g1210 | 1110 | ProSitePatterns | Phytochrome chromophore attachment site signature. | 310 | 319 | IPR013516 | - | |
Mibi06g1210 | 1110 | SUPERFAMILY | GAF domain-like | 190 | 376 | - | - | |
Mibi06g1210 | 1110 | Gene3D | PAS domain | 741 | 852 | - | - | |
Mibi06g1210 | 1110 | Pfam | Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase | 981 | 1093 | IPR003594 | - | |
Mibi06g1210 | 1110 | CDD | PAS | 605 | 712 | IPR000014 | - | |
Mibi06g1210 | 1110 | Pfam | Phytochrome region | 392 | 567 | IPR013515 | GO:0006355|GO:0009584 | |
Mibi06g1210 | 1110 | SMART | HisKA_10 | 869 | 933 | IPR003661 | GO:0000155|GO:0007165 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Mibi06g1210 | Mibi-ChrMibi06 | 32294298 | 32298967 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Mibi06g1210 | 4 | 1094 | Histidine Kinase Gene Family | AT4G18130 | 61.191 | 0.0 | 1417 |