Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g1148 ATGGATGAAGCTCAGGGCAGTTCAAGCTCCCTGCCTCCTTTCCTGACAAAGACTTATGAGATGGTGGATGATCCTTCCTCAGATTCGATTGTTTCCTGGAGTGCCTCTAACAAAAGTTTTATTGTATGGGATCCTCAAGAATTTGCAAGTGAGTTGCTACCAAGATTCTTTAAGCACAGTAACTTCTCTAGTTTCATCAGACAGCTGAACACATATGGTTTTAAAAAAGCTGATCCAGAACAATGGGAATTTGCGAATGATGATTTCATGAGAGGTCAACCGCATCTTTTGAAAAATATACATAGACGAAAGCCAGTTCATAGTCATTCTTTACAGAATCTCCAAGGACAAGGAGCTTCTCCATCTCCATTGACAGAACCGGAAAGACAAAGTTTAAATGGCAAAATAGAGAGGCTAAAACTTGAAAATGAACAGCTTTGTCTAGAGTTAGGGAGACATGAACAGGAGTGGAAAGCAAATGAAATTATAATTGGATGCTCAAAGGATAGATTGGGAAAGTTGGAAAGGAAACAACAAAAGATGGTCTCTTCTGTGTCTCAAGTGTTGCAGAAACCTGGAATTGCCCCGAACCTCTTGCAATTGTCAGAAACCCTGTATAGGAAACGAAGGTTGCCAAGAGGCGGTTACCTATGTGATGAAGCTGTAATTGAAGATGCTTCTGAATCTTCCTCAGTGATACCTAGAGATAATTCAGATGTAACTTCTGTTTTGTCATCAAATGTGGAGAAACTGGAACAGCTGGAATCACAGCTGTTATTTTTGGAGAGCATTGCTCATGATTTCGCTGATTCCTTCGTTCATAGCCATTCAAATATGGATCTTGGTGAATCTACAAATTGTGTTGATAGTCCTGCTCTCTCTTGTATGCAACTTGATGATGAACATCGCCCCGTGTCATCTGGCATTGACATGAACTCTGAGCCAGCTGGAGCTACTGTTTCTGATCCTGGTTCATCCAAAGAAAAACCTGTGGCAACAACCACTGTAGCAGCTGGCGCCAATGATGTATTCTGGGAACAGTTCTTGACAGAGAATCCTGGTTCTTCAGAAACACATGAAGTACAGTCAGAGCGAAAGGATTCTGGTAGCAGAAAGAATGAAGTAAAACCTAGTGATCGGAGTAAACTTTGGTGGAGCATGAACAATGTAAGTAGCCTTTCAGAACAGATGGGGCATCTTAGCCAAACGGAGAAAACTTAA 1221 0.4136 MDEAQGSSSSLPPFLTKTYEMVDDPSSDSIVSWSASNKSFIVWDPQEFASELLPRFFKHSNFSSFIRQLNTYGFKKADPEQWEFANDDFMRGQPHLLKNIHRRKPVHSHSLQNLQGQGASPSPLTEPERQSLNGKIERLKLENEQLCLELGRHEQEWKANEIIIGCSKDRLGKLERKQQKMVSSVSQVLQKPGIAPNLLQLSETLYRKRRLPRGGYLCDEAVIEDASESSSVIPRDNSDVTSVLSSNVEKLEQLESQLLFLESIAHDFADSFVHSHSNMDLGESTNCVDSPALSCMQLDDEHRPVSSGIDMNSEPAGATVSDPGSSKEKPVATTTVAAGANDVFWEQFLTENPGSSETHEVQSERKDSGSRKNEVKPSDRSKLWWSMNNVSSLSEQMGHLSQTEKT 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g1148 406 MobiDBLite consensus disorder prediction 358 379 - -
Mibi06g1148 406 MobiDBLite consensus disorder prediction 312 332 - -
Mibi06g1148 406 Gene3D - 6 104 IPR036388 -
Mibi06g1148 406 SMART hsfneu3 10 103 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mibi06g1148 406 Coils Coil 129 156 - -
Mibi06g1148 406 Pfam HSF-type DNA-binding 14 103 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mibi06g1148 406 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 6 249 IPR027725 -
Mibi06g1148 406 MobiDBLite consensus disorder prediction 107 130 - -
Mibi06g1148 406 SUPERFAMILY "Winged helix" DNA-binding domain 9 103 IPR036390 -
Mibi06g1148 406 MobiDBLite consensus disorder prediction 302 332 - -
Mibi06g1148 406 MobiDBLite consensus disorder prediction 109 129 - -
Mibi06g1148 406 MobiDBLite consensus disorder prediction 349 383 - -
Mibi06g1148 406 FunFam Heat shock transcription factor 1 7 104 - -
Mibi06g1148 406 PRINTS Heat shock factor (HSF) domain signature 14 37 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mibi06g1148 406 PRINTS Heat shock factor (HSF) domain signature 65 77 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mibi06g1148 406 PRINTS Heat shock factor (HSF) domain signature 52 64 IPR000232 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g1148 Mibi-ChrMibi06 31290386 31291722 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi06g1148 7 406 HSF AT4G18880 51.597 3.92e-120 353
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Mibi06g1148 HSF_DNA-bind 1.6e-32 CL0123