Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g1126 ATGGATCAGGCAAGAAAACCAGAAAGTGATGAGGCATCGGATCTCGTTGATGAAGGGACAGGAAAAAAGACAAATCTTTCGGTTGATGGGTCTGCTGATGCAGTAGCTGGGGGTAGCTTGAGTGGAGCCATCAAAAGTGCAGATGTGACTTCAGAAGAGACAAGTGATGATCCGGGATTGAATAAGAAACTTCATGAGGCTTCTGCAGAAGCTATGGATCAGGGTATGGGTGATCAGCAAAATAATACCAGTGACACATTCCATGTAGTTGATCAAGGAACAAGTTATAATTCAAGGAATTTGCATGACGGGGCTGTAATTGAGACCGTGGTTGTGATAGATTCTGCTGAGACAGAGGGTGTGAATGGAGATAATAGGAAGTTGGAAGCGAAGGTCAATGAATCGGAGTTGAACAAGGCCTCCATGAAATCACCAAAAAGGCCATCTGAAGCGGATAAGAATTCATGTGTGATCAATATAAAGTCCGGTGGCTGCAGGGAGTTTGGTGAGAATGTGGAGGGTGAAAGGATTTGTAGGATTTGTCATCTGGCTTCTGGGCAACCATCAGATTCGGCAGCTGCTAGCCCTACAAACAGTGCTCCTACTGGAGATTTAATTCAGCTTGGTTGTGCGTGTAAAGATGAGCTGGGTATTGCCCACAGTCATTGTGCTGAGGCATGGTTCAAGCTAAAAGGAAACAGATTGTGTGAAATATGTGGTGAAACTGCCAAAAATGTTTCGGGTGTTGCTGATCATGGATTTATGGAAGAGTGGAATGATAGAACATTCATTGACAACCACAGCACCCCATCTGGCATGTGTTGTGGATGCTGGCGTGGACAGCCATTTTGTAACTTCTTGATGGCATGTCTGGTAATAGCCTTTGTTCTGCCATGGTTTTTCCGTGTAAATATGTTCTGA 921 0.4452 MDQARKPESDEASDLVDEGTGKKTNLSVDGSADAVAGGSLSGAIKSADVTSEETSDDPGLNKKLHEASAEAMDQGMGDQQNNTSDTFHVVDQGTSYNSRNLHDGAVIETVVVIDSAETEGVNGDNRKLEAKVNESELNKASMKSPKRPSEADKNSCVINIKSGGCREFGENVEGERICRICHLASGQPSDSAAASPTNSAPTGDLIQLGCACKDELGIAHSHCAEAWFKLKGNRLCEICGETAKNVSGVADHGFMEEWNDRTFIDNHSTPSGMCCGCWRGQPFCNFLMACLVIAFVLPWFFRVNMF 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g1126 306 MobiDBLite consensus disorder prediction 1 61 - -
Mibi06g1126 306 PANTHER ZINC FINGER, RING-CH-TYPE 50 306 - -
Mibi06g1126 306 MobiDBLite consensus disorder prediction 124 152 - -
Mibi06g1126 306 MobiDBLite consensus disorder prediction 1 18 - -
Mibi06g1126 306 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 163 250 IPR013083 -
Mibi06g1126 306 SMART ringv_2 177 240 IPR011016 GO:0008270
Mibi06g1126 306 Pfam RING-variant domain 178 239 IPR011016 GO:0008270
Mibi06g1126 306 ProSiteProfiles Zinc finger RING-CH-type profile. 170 246 IPR011016 GO:0008270
Mibi06g1126 306 SUPERFAMILY RING/U-box 174 242 - -
Mibi06g1126 306 MobiDBLite consensus disorder prediction 71 90 - -
Mibi06g1126 306 MobiDBLite consensus disorder prediction 124 150 - -
Mibi06g1126 306 MobiDBLite consensus disorder prediction 74 90 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g1126 Mibi-ChrMibi06 31081334 31085193 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi06g1126 109 305 C3H Transcription Factor Family AT5G05830 35.149 1.06e-29 110
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi06g1126 06 31081334 31085193 Mibi06g1126 06 31081334 31085193 ECH