Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g1125 ATGTGGCTGACTTGTAATGATGCAAACATGTCCATTGTGAAATGTAATGCTATCTGTTTTTCTTTAATGCTCTCCTTTTTTTATGCCGTTCCTATGCCTACTAATCTTCTGGTTATTCCAATTTCATATCTCTATTTCCTTCCTTCTGGTGGGTGTGATGCGGCACAGGAAATTCCAAAAGGGGTTGGTTGCTTTTTGACGCAAAAGCAAAAGCAAAAGCAAGGTAACTGGAAGCTCAGTAGTGAAGATCCCAGTAAAAAAGTTTCAGACTTTTCCGGGTCTTTGCTTGATTTGATTTCTTGTTTCATGGAAGATGTGAGAAGGGTTGTTTGCTTCGTCTTCTTTCTGTGTCATTGGTTCGCTGCTGCTGCTAACACTGACAGTCTTCTTTCCCCAAAGGGTGTGAACTTTGAAGTTGCTGCTTTGATGTCAATGAAGAATAAAATGAAAGACGAATTGCGTGTTATGGATGGTTGGGATATTAATTCGGTTGATCCTTGTACTTGGAACATGGTCGGTTGCTCTGCTGAGGGCTATGTTATTATCCTGGACATGGCCAGTATGGGTTTATCTGGATCGCTTTCTCCAGGAATTGGAAATTTGAGCCACCTCCGAACTCTGTTGCTGCAGAACAATAAATTATCTGGACCCGTTCCTTCGGAGATAGGAAAGCTTTTGGAGCTTCAGACTCTTGACCTTTCTGGTAACCAATTTGATGGGGAAATCCCAAGTTCTCTGGGTTTTTTGACTCGTCTTAGTTACTTGCGGCTCAGTAGAAATAAACTATCTGGGCAGATTCCTCAGCTCGTTGCAAATCTCACAGGCCTTTCATTCTTGGACTTGTCATTCAATAATCTCAGTGGTCCCATTCCAAAAATTTTAGCAAAAGGTTACAGTATTTCAGGAAACAACTTCCTCTGTGCATCTTCATCAGCACAAATTTGTGTGGGCGTTTCAAATCCACTAAATGAAACTGGTTCGTCACTGGAAGTTGGCAGTCATCATCATCGGGTGCTTTCTGTTGCCATTGGCATTAGTTTAACGTTTCTAATTTCAGTAACGCTGCTTATCTGCTGTGTGCACTGGTACAGATCCCGCATCATGTATACATATTATGTAAAGGAAGATTATGAATTTGACATTGGTCATTTGAGGAGGTTTTCCTTCCGTGAATTGCAATCTGCTACTAGCAATTTCAGTCCAAAAAATATCCTAGGACAAGGTGGATTTGGTGTTGTCTACAAAGGAAGTCTTCCAAATAAAATGACAGTGGCAGTGAAGAGGCTGAAAGATCCCAATTACACTGGAGAAGTACAATTTCAAACTGAAGTTGAGATGATTGGCTTGGCAGTGCATCGGAATATCTTACGTCTCTATGGATTTTGTATGACATCTGATGAGAGGCTACTTGTGTACCCATACATGCCTAATGGCAGTGTTGCCGATCGTTTGAGAGACATTTTCCGTGAAAAGCCATCATTAGACTGGAATAGGCGAATGCGTATTGCTCATGGGGCAGCTCGTGGGCTTCTATATTTACATGAGCAGTGTAACCCAAAAATTATCCACAGGGACGTTAAGGCTGCAAACATTTTGCTGGATGAAAGTTTTGAAGCAGTGGTGGGGGATTTTGGTCTTGCTAAGCTCTTGGATCAAAGAGATTCACATGTCACTACTGCAGTTCGAGGCACAGTAGGACACATTGCCCCGGAATATCTCTCCACCGGGCAATCTTCTGAAAAAACTGATGTTTTTGGATTTGGCATATTACTTTTGGAGCTTATTACAGGGCAGAAGGCTCTGGATGCTGGAAATGGTCAAATCCAGAAGGGAATGATTCTTGATTGGGTGAAGACCTTATTTGAGGAGAAGAGATTGGAAGTGCTAGTTGATAGGGATCTGAGAGGACGTTTTGATCCAATAGAGTTGGAACAAGCAGTGAGGTTGTCTTTACAATGTACTCAATCACATCCCAGTCTCCGGCCAAAGATGTCGGAAATCTTGAGGATCCTGGAAGGCCTAGTTGGACAGGGTCAGCCGGAGGAGTCACACGGTGGAGGTAACATTTACGATGAAAGGAATTGCAGTTTCTCCAGAAATTACAGTGATGGGCATGATGAGCCTTCATTTATTATTGAAGCCATTGAGCTTTCTGGACCTCGGTGA 2166 0.4247 MWLTCNDANMSIVKCNAICFSLMLSFFYAVPMPTNLLVIPISYLYFLPSGGCDAAQEIPKGVGCFLTQKQKQKQGNWKLSSEDPSKKVSDFSGSLLDLISCFMEDVRRVVCFVFFLCHWFAAAANTDSLLSPKGVNFEVAALMSMKNKMKDELRVMDGWDINSVDPCTWNMVGCSAEGYVIILDMASMGLSGSLSPGIGNLSHLRTLLLQNNKLSGPVPSEIGKLLELQTLDLSGNQFDGEIPSSLGFLTRLSYLRLSRNKLSGQIPQLVANLTGLSFLDLSFNNLSGPIPKILAKGYSISGNNFLCASSSAQICVGVSNPLNETGSSLEVGSHHHRVLSVAIGISLTFLISVTLLICCVHWYRSRIMYTYYVKEDYEFDIGHLRRFSFRELQSATSNFSPKNILGQGGFGVVYKGSLPNKMTVAVKRLKDPNYTGEVQFQTEVEMIGLAVHRNILRLYGFCMTSDERLLVYPYMPNGSVADRLRDIFREKPSLDWNRRMRIAHGAARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDQRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQKALDAGNGQIQKGMILDWVKTLFEEKRLEVLVDRDLRGRFDPIELEQAVRLSLQCTQSHPSLRPKMSEILRILEGLVGQGQPEESHGGGNIYDERNCSFSRNYSDGHDEPSFIIEAIELSGPR 721
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g1125 721 ProSiteProfiles Protein kinase domain profile. 399 675 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi06g1125 721 Gene3D Ribonuclease Inhibitor 135 317 IPR032675 -
Mibi06g1125 721 Gene3D Phosphorylase Kinase; domain 1 368 474 - -
Mibi06g1125 721 SUPERFAMILY Protein kinase-like (PK-like) 383 671 IPR011009 -
Mibi06g1125 721 ProSitePatterns Protein kinases ATP-binding region signature. 405 427 IPR017441 GO:0005524
Mibi06g1125 721 FunFam Somatic embryogenesis receptor kinase 1 368 474 - -
Mibi06g1125 721 Pfam Protein kinase domain 402 668 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi06g1125 721 SMART serkin_6 399 670 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi06g1125 721 FunFam Somatic embryogenesis receptor-like kinase 1 475 684 - -
Mibi06g1125 721 Gene3D Transferase(Phosphotransferase) domain 1 475 678 - -
Mibi06g1125 721 SUPERFAMILY L domain-like 138 305 - -
Mibi06g1125 721 ProSitePatterns Serine/Threonine protein kinases active-site signature. 521 533 IPR008271 GO:0004672|GO:0006468
Mibi06g1125 721 Pfam Leucine rich repeat N-terminal domain 138 175 IPR013210 -
Mibi06g1125 721 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 110 670 - -
Mibi06g1125 721 FunFam Putative LRR receptor-like serine/threonine-protein kinase 135 317 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g1125 Mibi-ChrMibi06 31071535 31077154 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi06g1125 143 721 Receptor kinase-like Gene Family AT5G45780 72.241 0.0 839
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Mibi06g1125 Pkinase 6.5e-45 CL0016