Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g1119 ATGGGAGCTAAGGCTATGAACTCATGCTTTTGTAGATTCTTCATTCTTTTCGCTTTGTTTGCTATTCTTGTGGATTCTTCCTGCAAAAGCACCGACCACGAGCTGGTCTTCAAGGCCTTTCAATCCGTCCCTGGCTTCAATGATTCCTGGTTCCACACGCAAGATTCAAACTGTTCGAAATCTTCTCCGATTATTACTTCAATACAACTTCCTTCCAAGAATCTGAGCGGGGCTATCTCTTGGGCTTTCATCAGGAACATGTCCAACCTGCAGGTTCTTAATCTTTCTGGGAATTCCCTCCAAGGCCAAGTACCTCGCTGGCTTTGCGAATCTCACAGCTTATCAAAAGTCGATCTTTCTAATAACAGGTTTGGAGGCAGCATTGAGCTGGATTCCCCCACAGGACACTCTTCTCCGTTTTCATCTCTTCAGAGTCTCAATCTTTCCCACAACAGGTTCACCAATCTCCCTCGACTTTCTGGCTTCTCAAACCTCAAAATCCTCGACCTCTCCCATAACAATTTGAAGACTCTCCCCTCTGGCCTTCAAAGCCTCACCAAACTTCACCATCTCGACCTCTCAAGCTGCAAAATCAAAGCAAACGTAAAACCCATTTCTTCTCTTCGCTCTCTGAATCACCTGGACTTGTCAAACAACGTTTTCAATGGTAGCTTCCCTTCCGATTTCCCTCCTCTGGAAAACCTCAATTTCTTCAACATCTCTCACAACAACTTCACATCACTGGTTCACTTAGACAAGTACAAGAAATTCGGCAGCTCAGCTTTCATTGACGCAGGAAAAGGCTTCACTCACAATACATCTAATAACACCCCAACCCTTCATCCACCTCGTCCTCATGCTTTAAAAGCCTCAACGCGCCACCACAAACACAAACACAAAACTGTGGTTATAGCAGTGTCCTCTGTTTCAGCATGTGTTCTGGTTCTATTTTGTATATGGGTGTTTTGCATTTACAGAAAGAAGAGACGATTGGCGAAGAAAACGAAATGGGCAATCTCAAAGCCTGTTCCTTTGGGGGTAAAATTGGAAAAGTCGGGACCTTTCGCGTTTGAAACAGAGTCAGGAAGTTCATGGGTGGCGGATTTGAAAGAACCATCGTCGGCGCCGGTGGTGATGTTCGAGAAGCCATTGATAAACTTGAGCTTCAAGGACCTTATCGCCGCCACGTCACACTTCGGAAAAGAGTCGCTTTTGGCGGAGGGAAGATGTGGGCCCGTGTACAGAGCCGTCGTCGTCCCCGGTGACATCCACGTGGCAATCAAAGTACTGGAAAATGCGAGAGAGGTTGAAAACGATGACGCCATTGCTCTGTTTTGTGACCTGTCTAAGCTCAAACACCCCAATTTATTGCCACCCTCTGGATACTGCATTGCAGGCAAGGAGAAGCTGATATTGTACGAGTTCATGTCAAACGGCGATCTGGGCAGGTGGCTACACGAGCTGCCAACGGGGCAAACCAACGTGGAGGACTGGACAGGTGACACGTGGGAGATCCAAAACGGCACCGTATCCCAAACCCCATGCCCACCGGAAAAAACAAATTGGCTCACGCGCCACCGTATCTCCATCGGGATAGCGCGTGGGCTGGCATATCTCCACCACGCAGGCTCAAAACCCATAATCCACGGCCACCTAGTCACCTCAAACATCTTACTCGCCGACGATTTAGAGCCCCATATCGCCGATTTCGGGATCGGGAACATAGGAAAACAAAAACAGAGTATTAATTGTACGAGGGAGAGTGATGTGTACTGTTTTGGGGTGGTGTTGATGGAGATATTGACGGGGGAGTACGGGACGGCGGAGACGGTGGTTGGGGTGAGGAAGGCGGTGAGGGAAGGGAATGGGGAAGGCGTTTTGGATGAGAGGTTGAGAATGACTTGTTGTGAGTCGGAGAGTGAGATGCTTCAGAGTTTGCGAGTTGCCTACTTGTGTACGGCCGAGTCACCTGGGAAGAGGCCTACCATGCAACAAGTTTTGGGTTTGCTTAAGGATATTCGTCCACATGACCCGACTTGA 2040 0.4843 MGAKAMNSCFCRFFILFALFAILVDSSCKSTDHELVFKAFQSVPGFNDSWFHTQDSNCSKSSPIITSIQLPSKNLSGAISWAFIRNMSNLQVLNLSGNSLQGQVPRWLCESHSLSKVDLSNNRFGGSIELDSPTGHSSPFSSLQSLNLSHNRFTNLPRLSGFSNLKILDLSHNNLKTLPSGLQSLTKLHHLDLSSCKIKANVKPISSLRSLNHLDLSNNVFNGSFPSDFPPLENLNFFNISHNNFTSLVHLDKYKKFGSSAFIDAGKGFTHNTSNNTPTLHPPRPHALKASTRHHKHKHKTVVIAVSSVSACVLVLFCIWVFCIYRKKRRLAKKTKWAISKPVPLGVKLEKSGPFAFETESGSSWVADLKEPSSAPVVMFEKPLINLSFKDLIAATSHFGKESLLAEGRCGPVYRAVVVPGDIHVAIKVLENAREVENDDAIALFCDLSKLKHPNLLPPSGYCIAGKEKLILYEFMSNGDLGRWLHELPTGQTNVEDWTGDTWEIQNGTVSQTPCPPEKTNWLTRHRISIGIARGLAYLHHAGSKPIIHGHLVTSNILLADDLEPHIADFGIGNIGKQKQSINCTRESDVYCFGVVLMEILTGEYGTAETVVGVRKAVREGNGEGVLDERLRMTCCESESEMLQSLRVAYLCTAESPGKRPTMQQVLGLLKDIRPHDPT 679
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g1119 679 ProSiteProfiles Protein kinase domain profile. 399 679 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi06g1119 679 PRINTS Leucine-rich repeat signature 162 175 - -
Mibi06g1119 679 PRINTS Leucine-rich repeat signature 143 156 - -
Mibi06g1119 679 SMART LRR_typ_2 87 111 IPR003591 -
Mibi06g1119 679 SMART LRR_typ_2 140 161 IPR003591 -
Mibi06g1119 679 SMART LRR_typ_2 162 184 IPR003591 -
Mibi06g1119 679 SMART LRR_typ_2 208 231 IPR003591 -
Mibi06g1119 679 Pfam Leucine rich repeat 72 124 IPR001611 GO:0005515
Mibi06g1119 679 Pfam Leucine rich repeat 142 198 IPR001611 GO:0005515
Mibi06g1119 679 FunFam Calmodulin-binding receptor kinase CaMRLK 155 251 - -
Mibi06g1119 679 ProSiteProfiles Leucine-rich repeat profile. 164 186 IPR001611 GO:0005515
Mibi06g1119 679 SUPERFAMILY L domain-like 60 249 - -
Mibi06g1119 679 Gene3D Ribonuclease Inhibitor 133 260 IPR032675 -
Mibi06g1119 679 ProSiteProfiles Leucine-rich repeat profile. 142 163 IPR001611 GO:0005515
Mibi06g1119 679 Pfam Protein tyrosine and serine/threonine kinase 583 667 IPR001245 GO:0004672|GO:0006468
Mibi06g1119 679 Pfam Protein tyrosine and serine/threonine kinase 403 579 IPR001245 GO:0004672|GO:0006468
Mibi06g1119 679 SMART LRR_bac_2 140 159 - -
Mibi06g1119 679 SMART LRR_bac_2 162 181 - -
Mibi06g1119 679 SMART LRR_bac_2 232 251 - -
Mibi06g1119 679 SUPERFAMILY Protein kinase-like (PK-like) 373 668 IPR011009 -
Mibi06g1119 679 FunFam Putative LRR receptor-like serine/threonine-protein kinase 360 475 - -
Mibi06g1119 679 Gene3D Transferase(Phosphotransferase) domain 1 476 678 - -
Mibi06g1119 679 Gene3D Phosphorylase Kinase; domain 1 359 475 - -
Mibi06g1119 679 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 64 674 - -
Mibi06g1119 679 Gene3D Ribonuclease Inhibitor 35 132 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g1119 Mibi-ChrMibi06 31007280 31009766 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi06g1119 64 673 Receptor kinase-like Gene Family AT5G07280 31.240 4.19e-72 252
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-2 Mibi06g1119 PK_Tyr_Ser-Thr 5.7e-20 CL0016