Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g1118 ATGTATCGATCACACCCAAATTTGACTCCCATTGACAGATTCTTACGGAGCCTACACACACAGAATCACACTGCATCAGGATCAAGTTTCAATGATGATGGATTTGTGCCACCAAATGATGTACAGTCTTTGAACTGGACACAAGCTCAAATCCCACCATTCTGCTTTAGAAACAGAGTTTTGAGGAAGCACGGCGATGATAATGTGGGAAGGAGAAATGATAAGAAAGGGTCTCGTGTGTCTTTGATCAAAGGACAGTGGACTGATGAAGAAGACAGGAAATTGGTGAGATTGGTTAATCAATATGGTGTGAAGAAATGGGCTCAGATAGCAGAGAAGTTGAATGGAAGAGCGGGCAAGCAATGTAGAGAGAGATGGCATAATCATTTGCGCCCTGATATTAAGAAAGAGAGTTGGAGTGAAGAAGAAGAGAGGATACTGGTGGAAGCACATGCAAAAGTGGGGAACCGTTGGGCAGAAATAGCAAAGAGTATTCCAGGAAGAACAGAAAATGCAATCAAGAATCACTGGAATGCCACTAAAAGAAGGCAGAATTCAAAGAGAAAGAAGAAAATCACTCACACAACAACAACACACAATAAAAAGCCACGTCCCTCTATACTTGAAGACTACATCAGAAGCAAGACCCTGATCATAAGTAACACTATCCAGAATAGCAACATTATAGGAGAAAACCAATCTGAACCCTCTTATGAATCTGCTGTTTTTAATGGTAACTCTGTAATATCTGAACCATATGATGCGGAATTGCTCTACCTGCAAGGATTTTTTGCCAACAATCAGAATCAGAATCTGTTTCATTCTGTTGATACTGATCACTTTGAGAATTCTTCAACTTGCTTCTTCTTGGACTTTTGTCAACCTGACGGTGAACATCATCTTATCACAGATAAAAAAACAGGCTTCCATGAGAATCTCCTCACTGATGAAGTTTCCACCACTTCCACTAAACACTCTCAATCAGATCTTTATATCTCTCACTTGCTCAATGCACCACCCTCCTCCTCATCACTTATGGGGTATGGAAATCATCAAAATCTGAACATGAATTTGCTTATGGGGTATGAAGATAATTCAGATCAAAAGCCAGAGATGGATTTGATGGAACTGGTTTCTTCCAAGTTTACTGCAAGCACCAGCACTAGCATTTGA 1173 0.4032 MYRSHPNLTPIDRFLRSLHTQNHTASGSSFNDDGFVPPNDVQSLNWTQAQIPPFCFRNRVLRKHGDDNVGRRNDKKGSRVSLIKGQWTDEEDRKLVRLVNQYGVKKWAQIAEKLNGRAGKQCRERWHNHLRPDIKKESWSEEEERILVEAHAKVGNRWAEIAKSIPGRTENAIKNHWNATKRRQNSKRKKKITHTTTTHNKKPRPSILEDYIRSKTLIISNTIQNSNIIGENQSEPSYESAVFNGNSVISEPYDAELLYLQGFFANNQNQNLFHSVDTDHFENSSTCFFLDFCQPDGEHHLITDKKTGFHENLLTDEVSTTSTKHSQSDLYISHLLNAPPSSSSLMGYGNHQNLNMNLLMGYEDNSDQKPEMDLMELVSSKFTASTSTSI 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g1118 390 ProSiteProfiles SANT domain profile. 134 185 IPR017884 -
Mibi06g1118 390 FunFam Transcriptional activator Myb isoform A 83 136 - -
Mibi06g1118 390 Pfam Myb-like DNA-binding domain 87 144 - -
Mibi06g1118 390 MobiDBLite consensus disorder prediction 180 198 - -
Mibi06g1118 390 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 135 185 IPR017930 -
Mibi06g1118 390 ProSiteProfiles Myb-like domain profile. 79 130 IPR001005 -
Mibi06g1118 390 ProSiteProfiles Myb-like domain profile. 131 181 IPR001005 -
Mibi06g1118 390 MobiDBLite consensus disorder prediction 180 204 - -
Mibi06g1118 390 CDD SANT 87 130 IPR001005 -
Mibi06g1118 390 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 79 134 IPR017930 -
Mibi06g1118 390 SMART sant 135 183 IPR001005 -
Mibi06g1118 390 SMART sant 83 132 IPR001005 -
Mibi06g1118 390 SUPERFAMILY Homeodomain-like 81 177 IPR009057 -
Mibi06g1118 390 Gene3D - 138 200 - -
Mibi06g1118 390 PANTHER MYB PROTEIN-RELATED 84 224 - -
Mibi06g1118 390 CDD SANT 145 181 IPR001005 -
Mibi06g1118 390 Gene3D - 83 135 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g1118 Mibi-ChrMibi06 31000699 31004535 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi06g1118 75 385 MYB Transcription Factor Family AT5G58850 45.161 2.85e-80 251
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mibi06g1118 Myb_DNA-bind_6 1.7e-19 CL0123