Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g1117 ATGGCCGACGCCGTATCCAACAAACCCTCCACCAGCACCGCCGCCGCCAAGAAGCCCGGAAACAACACCCTCTTATTAGGTCGCTTCGAAGTCGGTAAGCTTCTCGGCCATGGAACCTTCGCGAAGGTTTACCACGCTCGCAATGTAAAATCCGGAGAAGGGGTCGCCATCAAAGTCATCGACAAGGAGAAAATCCTCAAGAGCGGCCTCGTCTCTCACATCAAGCGCGAGATCTCAATCCTCCGACGAGTCCGACACCCCAACATAGTTCAACTCTTCGAGGTCATGGCCACAAAAACCAAAATCTACTTCGTCATGGAATATGTTCGTGGTGGTGAGTTGTTCAATAAAGTCGCTAAAGGGAGGTTAAAAGAGGAAACTGCTAGGAAATACTTTCAGCAATTGGTATCTGCTGTAGGCTTTTGTCATGCTAGAGGGGTATTTCATAGGGATCTCAAGCCTGAAAACTTATTGCTTGATGAAAACGGGGATCTTAAAGTTTCTGACTTTGGATTGAGTGCTGTGTCTGATCAAATTCGGCAAGATGGGTTGTTCCACACGTTTTGTGGTACACCTGCTTATGTTGCCCCTGAGGTTTTAGCTAGAAAAGGTTATGATGGGGCTAAGGTTGATGTTTGGGCTTGTGGGGTTGTTCTGTTTGTCCTTATGGCTGGTTATTTGCCTTTCCATGATCAGAATATTATGGCAATGTATAAGAAGATTTACAGGGGTGAGTTTAGATGTCCTAAGTGGTTTACACCTGATCTAACTCGGCTTGTCACGCGTCTTCTTGATACTAACCCACAGACCAGAATTTCAATCCCGGAGATTATGGAGAATCGGTGGTTCAAAAAAGGGTTCAAACAGATAAAGTTCTATGTGGAGGATGATAAACTTTGTAATATTGATGATAAGATGGACAGGTTTGATGATATAGAATCAGTCTCGGATTACTCAGTATCAGAATCTGATTCTGAGGTTGAGACTAGAAGAAGAAACGCTTCACTTCCAAGACCAGCGAGCTTGAATGCTTTTGATATAATATCATTTTCTCCTGGTTTTGATCTTTCTGGGTTGTTTGAGGAGAAGGGGGATGAAGCTAGATTTGTGTCTGGTGCACCAGTGTCTACGATCATATCAAAACTTGAGGAAATCGCCAGACTGGTTAGCTTCACTGTGAGGAAGAAAGATTGCAGAGTGAGCTTGGAGGGTTCAAGAGAAGGCGTGAAGGGGCCATTGACAATTGCTGCTGAGGTTTTTGAATTAACGCCTTCTTTGGTGGTTTTGGAGGTCAAGAAAAAGGCAGGGGATAAAGCAGAATATGATCAGTTCTGTAACACTGAATTGAGACCTGGGTTGCTGAATTTGATGACAGAAGAACCTGCTACTTCTTCTCAAATATCTATTACGGATCCTGAACTGCCTCAATTGCCCGTAGATATTGATCATCCACATTACATACCTTCAGATACCGAATAG 1479 0.4408 MADAVSNKPSTSTAAAKKPGNNTLLLGRFEVGKLLGHGTFAKVYHARNVKSGEGVAIKVIDKEKILKSGLVSHIKREISILRRVRHPNIVQLFEVMATKTKIYFVMEYVRGGELFNKVAKGRLKEETARKYFQQLVSAVGFCHARGVFHRDLKPENLLLDENGDLKVSDFGLSAVSDQIRQDGLFHTFCGTPAYVAPEVLARKGYDGAKVDVWACGVVLFVLMAGYLPFHDQNIMAMYKKIYRGEFRCPKWFTPDLTRLVTRLLDTNPQTRISIPEIMENRWFKKGFKQIKFYVEDDKLCNIDDKMDRFDDIESVSDYSVSESDSEVETRRRNASLPRPASLNAFDIISFSPGFDLSGLFEEKGDEARFVSGAPVSTIISKLEEIARLVSFTVRKKDCRVSLEGSREGVKGPLTIAAEVFELTPSLVVLEVKKKAGDKAEYDQFCNTELRPGLLNLMTEEPATSSQISITDPELPQLPVDIDHPHYIPSDTE 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g1117 492 CDD STKc_SnRK3 28 282 - -
Mibi06g1117 492 Pfam Protein kinase domain 29 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi06g1117 492 FunFam Non-specific serine/threonine protein kinase 339 457 - -
Mibi06g1117 492 SUPERFAMILY Protein kinase-like (PK-like) 25 312 IPR011009 -
Mibi06g1117 492 Gene3D Transferase(Phosphotransferase) domain 1 20 337 - -
Mibi06g1117 492 ProSitePatterns Protein kinases ATP-binding region signature. 35 58 IPR017441 GO:0005524
Mibi06g1117 492 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 22 451 - -
Mibi06g1117 492 Pfam NAF domain 339 395 IPR004041 GO:0007165
Mibi06g1117 492 FunFam Non-specific serine/threonine protein kinase 19 333 - -
Mibi06g1117 492 ProSiteProfiles Protein kinase domain profile. 29 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi06g1117 492 MobiDBLite consensus disorder prediction 462 492 - -
Mibi06g1117 492 ProSiteProfiles NAF domain profile. 337 361 IPR018451 GO:0007165
Mibi06g1117 492 SMART serkin_6 29 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi06g1117 492 FunFam Non-specific serine/threonine protein kinase 20 108 - -
Mibi06g1117 492 CDD CIPK_C 343 453 - -
Mibi06g1117 492 ProSitePatterns Serine/Threonine protein kinases active-site signature. 147 159 IPR008271 GO:0004672|GO:0006468
Mibi06g1117 492 Gene3D Kinase associated domain 1, KA1 339 458 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g1117 Mibi-ChrMibi06 30989758 30991236 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi06g1117 22 492 CBL-interacting serine-threonine protein kinases AT4G18700 76.151 0.0 751
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Mibi06g1117 Pkinase 4.3e-74 CL0016