Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mibi06g1114 | ATGTCAGCGTCAGAAGGATTATTTCAGATGGAGGACAAGAAGAACAAGAGGTGCACTGAGGAACAGGTGGATATAGATGAGGAAATTACTTCATTGGGATCTTCTCGTGATCAGACATGTTCTTCCTTTGATTTGAATGAAGGAGCAAGCATTATGGAAGAAAGAGATGATGAAGAGAAAGGGAAGGACAATAATGAAGAAGGTGATTCGACTGATAATAATAATAGATGCACATCATCAACGGAGGAAGTGAATGAAAGACGAAGAAGGGTGAGACAGTATGTTAGATCAAAGATTCCTCGCCTTCGATGGACTCCTCAACTTCATCTCTCTTTTGTTCAAGCTGTTGAAAGGCTTGGTGGTCAAGACAGAGCCACACCCAAGTTGGTGCTTCAGCTAATGAATGTGAGAGGCCTTAGTATTGCTCATGTCAAGAGTCACTTGCAGATGTATCGAAGCAAGAAACTTGATGAGGCCGGGCAAGTTGTTGGTGGAACACACAGACCATGGAGGCAAAGAGAAGGAGTGAATTCACAGAGATGGATATCGCATTATTATCATAGCGGGAAGCCTCATGAATATCTAAAGATGGGAAACGGTGGAATCATCCTTTCAAGTAATTGCAATGTCGACCAGACAAGCAGTGTCGTCGACCCACGTCTGTTTCTACATTCAAACCCAACCCATTCATGGCAGCAATTACAGTGGCACTTGGATCATCAACTAGAACAGAAAAGGTGGCCTCCATTAATGGACATGATTAACGCTCATCAATGGAAGCTAAAAAGCTTACCTACCAATAATTCCACCTCAAAATCAGATCCACTTCATTCTAACTTCAATCATACTCTCAAGCTAGATTTTGAACCCCCCTTTCGGATCCAGATGAGGGAAGAAAAGCAATGGCCGCCTGATTTGCAATTGGGGTTGAGTCTTGGAGATGGCAAGGACATCAAAGAAATTAGCACTGAGCTTTCACTTTCTTAG | 987 | 0.4276 | MSASEGLFQMEDKKNKRCTEEQVDIDEEITSLGSSRDQTCSSFDLNEGASIMEERDDEEKGKDNNEEGDSTDNNNRCTSSTEEVNERRRRVRQYVRSKIPRLRWTPQLHLSFVQAVERLGGQDRATPKLVLQLMNVRGLSIAHVKSHLQMYRSKKLDEAGQVVGGTHRPWRQREGVNSQRWISHYYHSGKPHEYLKMGNGGIILSSNCNVDQTSSVVDPRLFLHSNPTHSWQQLQWHLDHQLEQKRWPPLMDMINAHQWKLKSLPTNNSTSKSDPLHSNFNHTLKLDFEPPFRIQMREEKQWPPDLQLGLSLGDGKDIKEISTELSLS | 328 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mibi06g1114 | 328 | Pfam | Myb-like DNA-binding domain | 102 | 152 | IPR001005 | - | |
| Mibi06g1114 | 328 | FunFam | Myb family transcription factor | 98 | 156 | - | - | |
| Mibi06g1114 | 328 | TIGRFAM | myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class | 100 | 155 | IPR006447 | GO:0003677 | |
| Mibi06g1114 | 328 | PANTHER | MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE | 75 | 262 | - | - | |
| Mibi06g1114 | 328 | Gene3D | - | 99 | 156 | - | - | |
| Mibi06g1114 | 328 | SUPERFAMILY | Homeodomain-like | 99 | 154 | IPR009057 | - | |
| Mibi06g1114 | 328 | MobiDBLite | consensus disorder prediction | 49 | 70 | - | - | |
| Mibi06g1114 | 328 | MobiDBLite | consensus disorder prediction | 9 | 24 | - | - | |
| Mibi06g1114 | 328 | MobiDBLite | consensus disorder prediction | 28 | 46 | - | - | |
| Mibi06g1114 | 328 | MobiDBLite | consensus disorder prediction | 1 | 89 | - | - | |
| Mibi06g1114 | 328 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 96 | 156 | IPR017930 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Mibi06g1114 | Mibi-ChrMibi06 | 30963314 | 30966342 | Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Mibi06g1114 | 91 | 161 | G2-like Transcription Factor Family | AT2G42660 | 77.465 | 1.31e-33 | 122 |
Transcription factors information
| Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
|---|---|---|---|---|---|---|---|
| TF | GARP-G2-like | Mibi06g1114 | Myb_DNA-binding | 2e-07 | CL0123 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Mibi06g1114 | 06 | 30963314 | 30966342 | Mibi06g1114 | 06 | 30963314 | 30966342 | ECH |