Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g1105 ATGCGTCACCATCCTTGCGGCCCTCCGTTGTGCACCCATGAGGTCGAAGACACCAGAAAAACATGGAGAGGTCGGGTCGAGCCGACCCGAAGTGAGGCCAGGCCAGGCCAGCTACACTGCACGGGCCATCTGAGACTGGGTGGGTTCCCTTCAACCAACGTCACGCGCTCTTCCCCGGCGAATCAACCTCTCTACCGTACCGCATTGTCTTCTTCCCTAACCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCATGCTTCTTCCTCCTCCTCCTCCTTCTCTCTCTCCTTCCCATGGCCGATTCTCTCTCCCCTCCTGTTAACCACCCTCGCACTTTTCCCGCCCGCGAAGACTGTTGGACCCTCGAAGCTTCCTCCACCCTCGTCGACGTCTGGGGCCGCCGTTACGTCCAGCTCAACCGCGGCAACCTCCGTCAAAAAGACTGGCAAGACGTCGCCGACGCCGTCAACGCCCTCCACGGCCACACCAAGAAGACACATCGCACCGATGTTCAGTGTAAGAATCGCATCGATACTATCAAAAAAAAGTACAAGCTTGAGAAAACTAGGGTTTCCTCCTCCCCCAATGCCTCCCCTTCCACCTGGCCCTTCTTCGATCGCCTAGACCTCTTAATTGGACCTTCTTTGACCGCCAAAAAGGCTTCCCCGTCGCCGTCGCCGCTTTCTTTGCCCTATCGTAAAACACCGTCCCCGGTGCCGACGACGAAGGCCTTGGCGATGCCGCCGAAGCGGTCGGCGGCGGCGGTGTTAGAGAATGGGTTCTTCATGAGGAATTATTCGGCTATGGCGGCGGCTGCGGCGGCGGCGGCGGAATCCGATGAGGATGAAGAGAGGGGGAGTGAGGTTGAGGTTGAGGAAGAGGAAGAGAGGGAGAAGGAAGGGTTGAAGAGCTTGGCGAAAGCTATAGAGAGGTTTGGGGAGGTTTATGAGAGGATGGAGAGGGAGAAATTGAGGCAGATGGTGGATCTGGAGAAACAGAGGATGCAGTTTACCAAAGATATGGAAGTACAGAGGATGCATATTTTCATGGACACGCAGGTTCAGTTGGGGAGGATCAAACGCGGCAAGCGATCTGGGTCTAATGATATGTATAGCTAG 1116 0.5609 MRHHPCGPPLCTHEVEDTRKTWRGRVEPTRSEARPGQLHCTGHLRLGGFPSTNVTRSSPANQPLYRTALSSSLTLSLSLSLSLSCFFLLLLLLSLLPMADSLSPPVNHPRTFPAREDCWTLEASSTLVDVWGRRYVQLNRGNLRQKDWQDVADAVNALHGHTKKTHRTDVQCKNRIDTIKKKYKLEKTRVSSSPNASPSTWPFFDRLDLLIGPSLTAKKASPSPSPLSLPYRKTPSPVPTTKALAMPPKRSAAAVLENGFFMRNYSAMAAAAAAAAESDEDEERGSEVEVEEEEEREKEGLKSLAKAIERFGEVYERMEREKLRQMVDLEKQRMQFTKDMEVQRMHIFMDTQVQLGRIKRGKRSGSNDMYS 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g1105 371 Gene3D - 119 185 - -
Mibi06g1105 371 MobiDBLite consensus disorder prediction 280 294 - -
Mibi06g1105 371 MobiDBLite consensus disorder prediction 216 245 - -
Mibi06g1105 371 MobiDBLite consensus disorder prediction 273 301 - -
Mibi06g1105 371 Pfam Myb/SANT-like DNA-binding domain 116 209 IPR044822 -
Mibi06g1105 371 Coils Coil 301 321 - -
Mibi06g1105 371 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 96 362 IPR044823 -
Mibi06g1105 371 Coils Coil 276 296 - -
Mibi06g1105 371 FunFam trihelix transcription factor ASIL2 119 185 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g1105 Mibi-ChrMibi06 30881299 30886611 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi06g1105 202 370 Trihelix Transcription Factor Family AT3G14180 29.469 3.54e-15 74.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Mibi06g1105 Myb_DNA-bind_4 8.5e-23 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi06g1105 06 30881299 30886611 Mibi06g1105 06 30881299 30886611 ECH