Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g1095 ATGGTTTATTGCTCTTATAATTCGATTTCTTCATCTGGGTCTGATATATCGAGGCTGTTCAATCCAATTTCGCATAAAGTTGTTGATTCTAAAGGGGTTCCGCAGAGTGAGAAGGAGGATCTGATTAATTCCCCCTTGAAGATTGGAAAGAAAGAGGTGTCTGAGGCAAAAGCTTTGGCTGCTATGAAGAATCACAGTGAAGCAGAGAGAAGAAGAAGGGAGAGAATTAATGGTCACCTCGATACACTTCGTGGTCTTGTACCCAGCAATGCCAAGATGGATAAAGCAACATTACTGGCTGAAGTTATCAACCAGGTTAAGTTACTGAAGAAGAATGCAATGGAAGCAAGCAGAGGTTTTCTAATCCCAATGGATGATGATGAGGTTAAAGTTGAACCATACAACTATGAAGGAAGCGAAGGATCAATGTTCTACATGGCATCTATATGCTGCGATTACCGGCCGGAGCTACTAGCCGACCTAAGACAGGCTTTTGATGGTCTAAAACTACAACTGATGAGGGCAGAAATATCAACTTTGGGAGGAAGAGTGAAGAATGTATTTTTATTTAGATGCTGCAAAACAGAACATATTAATATTGAGGCATGCCAATTTGTTCCAAGTACTGTCCACCAGGTACTAAGTTCTGTACTGGAGAAGGCTTCTAGCTCACTCGAATACTCTCTAGGAATGTCACTTAGAAACAAGCGTAGAAGACTTTGCTTCATTGAAACATCAACTTCCTCATGA 750 0.4093 MVYCSYNSISSSGSDISRLFNPISHKVVDSKGVPQSEKEDLINSPLKIGKKEVSEAKALAAMKNHSEAERRRRERINGHLDTLRGLVPSNAKMDKATLLAEVINQVKLLKKNAMEASRGFLIPMDDDEVKVEPYNYEGSEGSMFYMASICCDYRPELLADLRQAFDGLKLQLMRAEISTLGGRVKNVFLFRCCKTEHINIEACQFVPSTVHQVLSSVLEKASSSLEYSLGMSLRNKRRRLCFIETSTSS 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g1095 249 PANTHER TRANSCRIPTION FACTOR BHLH30 40 244 IPR045847 GO:0003700|GO:0006355
Mibi06g1095 249 SMART finulus 66 115 IPR011598 GO:0046983
Mibi06g1095 249 Coils Coil 158 178 - -
Mibi06g1095 249 Gene3D - 55 118 IPR036638 GO:0046983
Mibi06g1095 249 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 64 112 IPR036638 GO:0046983
Mibi06g1095 249 Pfam Helix-loop-helix DNA-binding domain 64 109 IPR011598 GO:0046983
Mibi06g1095 249 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 60 109 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g1095 Mibi-ChrMibi06 30785094 30788139 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi06g1095 47 240 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G68810 41.538 2.74e-33 122
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mibi06g1095 HLH 1.9e-10 No_clan