Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g1071 ATGGGTTTCTCAGACGAAGAAGATAACTCACTCGGTTTCGGCCTGAAGGTGATGCTCGCCGCAGCTTTCACTTTATTCGCCGTCGTCTTCTTCGTAATCGTCTTCCACTTCTACTTACGACGCCGCCGTCGAAGTCTCCACCTCAGATTTCGCAGACGCCTCGCCGATCAACCGATTTACCAGATCGGCTCTCAGGTTTTGCCGATTGATGTGGAATTACGCTCGCCGGACGGCGGCGGCCGTCAGGGCCTTGAATCTTCCGTCATAGCTTCGATTCCTAAACTGTTGTACAAGCAGACGGAACGGTTCAACGACGGCGACGCCGTGGAGTGCTCGGTTTGCTTGGCCGTGATTGGGGAAGACGCCGCCGTTAGGGTTTTGCCTAATTGCAAGCATGTGTTTCATGTTGATTGTGTTGATACTTGGTTCGGTTCCAATATTACTTGTCCGATTTGCCGCACGGTGGTTGGCGGTGGCGCTGTTCAACCCACGGCGCCGCCGGTATTAGACAGTGGCGGGACGGTCTAA 528 0.5436 MGFSDEEDNSLGFGLKVMLAAAFTLFAVVFFVIVFHFYLRRRRRSLHLRFRRRLADQPIYQIGSQVLPIDVELRSPDGGGRQGLESSVIASIPKLLYKQTERFNDGDAVECSVCLAVIGEDAAVRVLPNCKHVFHVDCVDTWFGSNITCPICRTVVGGGAVQPTAPPVLDSGGTV 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g1071 175 ProSiteProfiles Zinc finger RING-type profile. 111 153 IPR001841 -
Mibi06g1071 175 SUPERFAMILY RING/U-box 92 156 - -
Mibi06g1071 175 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 76 157 IPR013083 -
Mibi06g1071 175 PANTHER RING FINGER DOMAIN-CONTAINING 21 156 - -
Mibi06g1071 175 Pfam Ring finger domain 110 153 IPR001841 -
Mibi06g1071 175 CDD mRING-H2-C3H2C2D_ZSWM2 110 153 - -
Mibi06g1071 175 SMART ring_2 111 152 IPR001841 -
Mibi06g1071 175 FunFam E3 ubiquitin-protein ligase ATL6 73 157 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g1071 Mibi-ChrMibi06 30552795 30553322 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi06g1071 9 156 C3H Transcription Factor Family AT2G42360 38.816 7.67e-27 99.8