Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g1065 ATGGCTGTTCATGGCAATAAAGATTCAGCTTCTTCTGAAGGCATTCTTGAGAACGTGTGGTCCAAAATCATTAACAGCAACAACAATGGATCACAATGGGAAGAACTGCCTAATCTAGATGGAAGAGAAGGTTCTATGGAAGTTCTGAGAAGGCTTCCTAGTTTAGGAAGATGGATATCAATGGGAGCTGATTTCTGGGAAGAAATCTTAGATGGGTTTCCAGCTTGTAGCAGTAATAACGATTCAGAAATTTGCAGAGCTTTTGAATGCAATAAAAAGGTTGAAGATGAAGAAGAAGTGAGGGTGAAAGCAGAGAGGAAGGTATCAGCAAAACACTACAGAGGAGTGAGAAGAAGGCCATGGGGGAAATATGCAGCAGAAATAAGAGACTCATCAAAGAAAGGAGCTAGAGTTTGGCTTGGGACTTTTGACACAGCAGAGGAAGCAGCTTTGGCTTATGATAAGGCTGCTTTGAGAATTAGAGGTCCTAAGGCATATCTGAATTTCCCACTTGAGACTGTTTCAAAAGCCTTAGGATTTGAGCAGAAAGGAAATTTCTGCAGTTCTAGAAGAAAGAGAAGGTGTAGTGAGAGAGATGAAGTTGTTGTTGGTGTGATGATGAATAATGAAGAACCTCCTGCAAAGAAGAAAATGGTGGCAAGCTTGGGAGGGATGATAGGGAATGATGAAGATGATGATGTTTTTGAGTTTCAGGACTTGGGGATTGATTATTTGGAAAGTTTGTTATCTTCCTTTTGA 759 0.4058 MAVHGNKDSASSEGILENVWSKIINSNNNGSQWEELPNLDGREGSMEVLRRLPSLGRWISMGADFWEEILDGFPACSSNNDSEICRAFECNKKVEDEEEVRVKAERKVSAKHYRGVRRRPWGKYAAEIRDSSKKGARVWLGTFDTAEEAALAYDKAALRIRGPKAYLNFPLETVSKALGFEQKGNFCSSRRKRRCSERDEVVVGVMMNNEEPPAKKKMVASLGGMIGNDEDDDVFEFQDLGIDYLESLLSSF 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g1065 252 PRINTS Ethylene responsive element binding protein signature 113 124 IPR001471 GO:0003700|GO:0006355
Mibi06g1065 252 PRINTS Ethylene responsive element binding protein signature 136 152 IPR001471 GO:0003700|GO:0006355
Mibi06g1065 252 ProSiteProfiles AP2/ERF domain profile. 112 170 IPR001471 GO:0003700|GO:0006355
Mibi06g1065 252 SMART rav1_2 112 176 IPR001471 GO:0003700|GO:0006355
Mibi06g1065 252 PANTHER DNA-BINDING DOMAIN 95 207 IPR044808 GO:0003700|GO:0009873
Mibi06g1065 252 CDD AP2 111 170 IPR001471 GO:0003700|GO:0006355
Mibi06g1065 252 Pfam AP2 domain 112 162 IPR001471 GO:0003700|GO:0006355
Mibi06g1065 252 Gene3D AP2/ERF domain 111 172 IPR036955 GO:0003700|GO:0006355
Mibi06g1065 252 FunFam Ethylene-responsive transcription factor 2 111 172 - -
Mibi06g1065 252 SUPERFAMILY DNA-binding domain 112 172 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g1065 Mibi-ChrMibi06 30484339 30485097 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi06g1065 15 252 AP2-EREBP Transcription Factor Family AT4G18450 36.275 1.91e-39 137
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mibi06g1065 AP2 2.7e-16 CL0081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi06g1065 06 30484339 30485097 Mibi06g1065 06 30484339 30485097 ECH