Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g1064 ATGGATAAGAGAGTTTCAGAAACAGAGGAAAAACAGAGGAACCAATCAATCATGACAGATCTTCCTTTCAACGAGAACGATTCACAAGACATGTTCATATACCAAGTCCTCCACGAGGCCAATACTCTTCAAACCACCACCACCAACTCCAACCCCTCCTCCGCCGGCGGCGCCTCCGCATTCCTCCCGGACAGGCAAAACGCCGCCGTGCAGAAGGGGCTAGAGCCGACGAGGGCCGTCGGGAAGAAGCATTACAGAGGCGTGAGGCGGCGGCCGTGGGGGAAGTACGCGGCGGAGATCAGAGACTCCTCCCGCCACGGGGCGCGCGTGTGGCTCGGCACGTTCGAGACCGCCGAGGAGGCCGCCGTGGCTTACGACCGAGCCGCCTTTAGGATGAGAGGAGCCAAGGCCATGCTCAATTTTCCTGAGCAAATAGTGGCTTCTTCCATGGAAGTATCTTGTGATCCTAATAAACCTAGTAATTTTAGCTCATCCGGAAGATTCTGTGATCAAGATTCAGATTCAAGTGGTGGTAGCAGCTCCTACGTTGATCTTGATTCCATAGGAACAAACTGA 576 0.5417 MDKRVSETEEKQRNQSIMTDLPFNENDSQDMFIYQVLHEANTLQTTTTNSNPSSAGGASAFLPDRQNAAVQKGLEPTRAVGKKHYRGVRRRPWGKYAAEIRDSSRHGARVWLGTFETAEEAAVAYDRAAFRMRGAKAMLNFPEQIVASSMEVSCDPNKPSNFSSSGRFCDQDSDSSGGSSSYVDLDSIGTN 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g1064 191 PANTHER DNA-BINDING DOMAIN 34 159 IPR044808 GO:0003700|GO:0009873
Mibi06g1064 191 MobiDBLite consensus disorder prediction 1 24 - -
Mibi06g1064 191 SUPERFAMILY DNA-binding domain 84 143 IPR016177 GO:0003677
Mibi06g1064 191 MobiDBLite consensus disorder prediction 155 191 - -
Mibi06g1064 191 FunFam Ethylene-responsive transcription factor 2 83 143 - -
Mibi06g1064 191 ProSiteProfiles AP2/ERF domain profile. 84 142 IPR001471 GO:0003700|GO:0006355
Mibi06g1064 191 CDD AP2 83 144 IPR001471 GO:0003700|GO:0006355
Mibi06g1064 191 Pfam AP2 domain 84 134 IPR001471 GO:0003700|GO:0006355
Mibi06g1064 191 Gene3D AP2/ERF domain 83 144 IPR036955 GO:0003700|GO:0006355
Mibi06g1064 191 PRINTS Ethylene responsive element binding protein signature 108 124 IPR001471 GO:0003700|GO:0006355
Mibi06g1064 191 PRINTS Ethylene responsive element binding protein signature 85 96 IPR001471 GO:0003700|GO:0006355
Mibi06g1064 191 SMART rav1_2 84 148 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g1064 Mibi-ChrMibi06 30479847 30481409 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi06g1064 21 145 AP2-EREBP Transcription Factor Family AT5G47220 51.538 1.04e-39 134
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mibi06g1064 AP2 1.2e-14 CL0081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi06g1064 06 30479847 30481409 Mibi06g1064 06 30479847 30481409 ECH