Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g1060 ATGGAATACGTACTTAAAGTGATTTTGCTCCTGCTTCTATGCCAATCTCTGCATGTATCAGCACTGAGCTCTTATCAGGACTTTAGTTCCCTACAATCTCTCACAGAATCTTGGCAGAACAAACCACCAAGCTGGGTGGGTTCTGATCCTTGTGGCAGTGGTTGGGAAGGAATTGGATGCACCAATTCGAGAGTGACCTCAATAATATTAGCAAGCATGAATTTGGTGGGCATGCTGTCTTCAGATATTGAGTTATTATCTGAGTTAGACACTTTGGATCTGTCTTACAACGAGGGCCTGACAGGAACAATTCCAACAGAGATCGGAAATTTGAGGAAATTAAAAACCCTTATATTAGTTGGTTGTAATTTCTTTGGTAGTATTCCAGATTCAATAGGATCTTTGCAGCAGCTGACCTTTCTAGCTCTGAACTCCAATAAGTTCAGTGGAAACATTCCACCTACCATTGGCAATCTAACCAATATTAATTGGCTAGACCTTTCTGATAACCAGCTTGAAGGACCTATCCCAATCTCTAAAGAAGGAGTACTTGGACTTGAAAAGCTTCTTAAGGCAAAGCACTTTCACATGGGAAACAATAGGCTCTCTGGTGGAATCCCAGCTGAAATTTTTAATCCAAATATGAGTCTGATCCATGTGCTTTTTGACAGCAATCAACTAAGTGGTGGTATTCCTAGTGCCATTGGGCAGGTGAACTCATTGGAGGCAGTCCGTTTTGATAGGAACCAATTAACTGGGAGCGTGCCTTCAAGTATCAGCAATCTCAGTAATCTTGGTGACCTGTATTTATCAAATAATAGGTTGAATGGTTCTCTGCCAGATCTTACTGGAATGAGTCTTCTTAACTATGTGGATCTGAGTAACAATACTTTCAATTCTTCTGCTATTTTTCCCTCATGGGCCTCAAATTTGCTGCTTATGACAACATTGAAGTTGGAGAACACCAACCTTCAAGGAGACATACCTGTCTCCTTATTTAACCAACCCAGTTTAGAGACTGTAGTATTAAAGGGTAACCAGCTCAGTGGTGTCCTAGATATTGGCAATGCTGGCAGCAACCGCTTGCAACTCATTGATTTGGAGAATAACACAATCTCCGACTTCACACAGAAAAACATGAACTATAAAGTTTCAGTAGTACTAGTTGGCAACCGGATTTGCCTTGAAAAAGACGCTCCTACCAAACGTTACTGCCAAGAACCCACATCCAATTCCTTATATTCAACGCAGCCAAATAATTGCTCACCTCTTCCTTGCAGTTCTGGTCAGATTTCCAGTCCTAACTGCAAATGTTCGTTTCCATACACTGGAACTCTATATGCCAGAGTTCCTAGTTTCTCAGACCTTGGTAATGCAAGTTATTTTAGGGAACTCGAGCTGTCTCTAATGACTGCTTTTGAATTACAAAATCTTCCGGTGGATTCTGTTTCTCTAAGTAATCCGTTCAGGAATCCATCTACTGATTATCTTGAATTATCCCTGAAAGTCTTCCCATCTTCAAGTGATCGTTTCAATAGAACTGGTGTTTCAAACATTGCTTTTGCGATCAGCAGCCAGCTTCTTAAGTTCCCAAAATTTTTCCTTCCTTATTTCTTCATTGGTGATGTCTACGGATACGATGCAGGAAATAGATCAAAGCCACATACTGGAGTTATAGTTGGTGTAGTAGTTGCTGTTGTGGTCCTTCTGGTAGTAATAGTCCTTGCAGTAATGTATGCCATACGTCAAAAGAAAAAAGCAAAAAGATCTGCAGAACTGAACCCTTTTGTAAACTGGGAACTGAACAAGAACAGCGGCATGGCTCCTCAGTTAAAAGGAGCACGATGGTTTACTTTAGAAGAGCTCAAAAAATGCACCGACAACTTCTCAGAAGACAAGACAGTTGGATCTGGAGGCTATGGAAAGGTTTACCGAGCTGTTCTGCCTACTGGAGAACTAGTTGCCATCAAACGGGCAGCAAAAGAATCCATGCAGGGTGCTGTAGAGTTCAAAACTGAGATTGAACTTCTATCAAGGCTTCATCATAAGAATGTTGTCGGTCTTGCGGGTTTCTGTTTCGATAACGGCGAACAAATGCTGGTGTATGAGTATATTCCAAATGGCACTTTAATGGATAGTCTTTCAGGAAAGTCTGGAATCAGAATGGACTGGATGAGAAGGCTTAAAGTAGCCCTGGGTGCAGCCAGGGGTCTGGCCTATCTTCATGAACTTGCCAACCCACCAATCATACACAGGGACATAAAATCAAGCAATATCCTACTCGATGAGAACCTTAATGCAAAAGTTGCAGATTTCGGACTCTCCAAGCTTCTTGTTGACAGTGAAAGGGGCCATGTCACAACTCAAGTCAAAGGGACAATGGGTTACTTGGATCCTGAGTATTACATGACACAACAGTTGACCGAAAAAAGCGATGTATATAGCTTTGGAGTGCTGATGCTGGAACTAGTGACTGCAAGAAGGCCAATAGAGAAAGGGAAGTATATAGTGAGAGAGGTACAGAATGTAATGGACACATCAAAAGAACTATTCAACCTTCATTCCATAATAGATCCATTCATCAACATAGTAACTCCTCCACCGCATGGTTTGGACAAGTTTGTGGGCCTAGCAATGAGGTGTGTCAGAGAATATGCAGCTGACAGGCCATCAATGGCTGAGGTGGTGAAGGAGATTGAGAATATAATGGAGCTTGCTGGATTGAACCCAACTTCTGAATCAGATCCTACAACAGAAGAAATTGATGTGGACAAAAATGGTGGCAATTTACGCCATCCTTATGGCCATGAAGATGAAGGTTTTAGCTACAGTGGACCCTTTCCTTCAACAAAGGTAGAGCCTCAGTGA 2868 0.4184 MEYVLKVILLLLLCQSLHVSALSSYQDFSSLQSLTESWQNKPPSWVGSDPCGSGWEGIGCTNSRVTSIILASMNLVGMLSSDIELLSELDTLDLSYNEGLTGTIPTEIGNLRKLKTLILVGCNFFGSIPDSIGSLQQLTFLALNSNKFSGNIPPTIGNLTNINWLDLSDNQLEGPIPISKEGVLGLEKLLKAKHFHMGNNRLSGGIPAEIFNPNMSLIHVLFDSNQLSGGIPSAIGQVNSLEAVRFDRNQLTGSVPSSISNLSNLGDLYLSNNRLNGSLPDLTGMSLLNYVDLSNNTFNSSAIFPSWASNLLLMTTLKLENTNLQGDIPVSLFNQPSLETVVLKGNQLSGVLDIGNAGSNRLQLIDLENNTISDFTQKNMNYKVSVVLVGNRICLEKDAPTKRYCQEPTSNSLYSTQPNNCSPLPCSSGQISSPNCKCSFPYTGTLYARVPSFSDLGNASYFRELELSLMTAFELQNLPVDSVSLSNPFRNPSTDYLELSLKVFPSSSDRFNRTGVSNIAFAISSQLLKFPKFFLPYFFIGDVYGYDAGNRSKPHTGVIVGVVVAVVVLLVVIVLAVMYAIRQKKKAKRSAELNPFVNWELNKNSGMAPQLKGARWFTLEELKKCTDNFSEDKTVGSGGYGKVYRAVLPTGELVAIKRAAKESMQGAVEFKTEIELLSRLHHKNVVGLAGFCFDNGEQMLVYEYIPNGTLMDSLSGKSGIRMDWMRRLKVALGAARGLAYLHELANPPIIHRDIKSSNILLDENLNAKVADFGLSKLLVDSERGHVTTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVLMLELVTARRPIEKGKYIVREVQNVMDTSKELFNLHSIIDPFINIVTPPPHGLDKFVGLAMRCVREYAADRPSMAEVVKEIENIMELAGLNPTSESDPTTEEIDVDKNGGNLRHPYGHEDEGFSYSGPFPSTKVEPQ 955
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g1060 955 FunFam Leucine-rich repeat protein kinase family protein 597 704 - -
Mibi06g1060 955 FunFam LRR receptor-like serine/threonine-protein kinase HSL2 705 915 - -
Mibi06g1060 955 Gene3D Ribonuclease Inhibitor 21 181 IPR032675 -
Mibi06g1060 955 Gene3D Ribonuclease Inhibitor 182 282 IPR032675 -
Mibi06g1060 955 MobiDBLite consensus disorder prediction 918 938 - -
Mibi06g1060 955 ProSitePatterns Protein kinases ATP-binding region signature. 635 661 IPR017441 GO:0005524
Mibi06g1060 955 SUPERFAMILY Protein kinase-like (PK-like) 615 910 IPR011009 -
Mibi06g1060 955 Gene3D Ribonuclease Inhibitor 283 420 IPR032675 -
Mibi06g1060 955 Gene3D Phosphorylase Kinase; domain 1 599 704 - -
Mibi06g1060 955 FunFam Leucine-rich repeat family protein 26 181 - -
Mibi06g1060 955 FunFam Leucine-rich repeat protein kinase family protein 182 281 - -
Mibi06g1060 955 SUPERFAMILY L domain-like 302 393 - -
Mibi06g1060 955 MobiDBLite consensus disorder prediction 907 955 - -
Mibi06g1060 955 PANTHER RECEPTOR-LIKE PROTEIN 55 36 902 - -
Mibi06g1060 955 CDD STKc_IRAK 635 902 - -
Mibi06g1060 955 ProSitePatterns Serine/Threonine protein kinases active-site signature. 749 761 IPR008271 GO:0004672|GO:0006468
Mibi06g1060 955 Gene3D Transferase(Phosphotransferase) domain 1 705 923 - -
Mibi06g1060 955 SUPERFAMILY L domain-like 30 296 - -
Mibi06g1060 955 ProSiteProfiles Leucine-rich repeat profile. 264 286 IPR001611 GO:0005515
Mibi06g1060 955 SMART serkin_6 629 903 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi06g1060 955 Pfam Protein kinase domain 630 897 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi06g1060 955 ProSiteProfiles Protein kinase domain profile. 629 903 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g1060 Mibi-ChrMibi06 30444537 30451946 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi06g1060 7 955 Receptor kinase-like Gene Family AT5G49760 54.498 0.0 957
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Mibi06g1060 Pkinase 1.1e-48 CL0016