Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g1047 ATGGGTTTGATCGATCTCAACACTACTGAGGAAGACGAAACGCCGTCGTCTGGTTCCTCTGCTTCATTGTCTTCTCATTCTGGTATTAGCATTTCTGCCTCAACTTCTCCTTCTCCTTCCTCTGTATGCTTGGAGCTATGGCATGCCTGTGCGGGTCCTATGATCTCGTTACCCAAAAAGGGAAGCATCGTTGTTTACTTCCCTCAGGGCCACCTTGAACAGCAGGCTCAGGATTTTCCTGTCTCTGCGTACAATATCCCACCCCATGTTTTCTGTCGTGTTGCTGATGTTAAGCTCCATGCGGAGGAAGGCATAGATGAGGTGTACTGTCAGGTGTCCCTGGTTCCTGAAAGTGAGCAAGCTGAAAGAAGATTTCGGGAAGGTGAAATCGATACCGACTATGAAGATGAGGATGCTGTAGCTGCAGTGAAGTCTACAACACCACATATGTTCTGCAAGACCCTTACAGCATCTGATACTAGCACTCATGGTGGATTCTCTGTTCCTAGGCGTGCAGCTGAAGATTGCTTCCCACCACTGGATTACAATCAACAGCGTCCTTCGCAAGAGCTTGTAGCAAAGGATCTGCATGGCCTGGAGTGGAAGTTCAGGCATATTTACAGGGGGCAACCTCGCAGGCATTTGCTTACAACTGGTTGGAGTGCATTTGTAAACAAGAAGAAGCTTGTATCTGGAGATGCTGTGCTGTTTCTGAGGGGTGAGGATGGAGTACTGAGATTAGGCATTCGCAGGGCATCTCAGTTGAAATGTGGTAGTAACTTTTCTATTCCATCGGGCCTGCATCTTAATCCCAGCAGTTTCATGGATGTGGTTAACGCGATATCTACAAGATCTGCCTTTAGCGTGTGCTACAATCCTAGGGTTAGCTCATCTGAGTTCATAATTCCACTCAACAAATTTTTGAAGAGCCTTGATCAATTTTATTCAGTTGGAATGAGGTTCAGGATGCGTTTTGAAACTGAAGATGCTTCAGAACGAAGATGTGCCGGATTAGTTATTGGAATTAGCGATGCAGATCCTGCTAGATGGCCTGGATCTAAATGGAGATGCCTTACGGTAAGGTGGGAAGACTTGGAAGGCACTAGGCATAACAGGGTTTCCCCATGGGAAATTGAGCCATCTGGTTCTGCATCCAATCCCAACAACTTCAATGCAGCTGGTTTAAAGAGGACCAGGATTGGTTTGCCTTCAAAACAAGAATTTCCAGTTCCAAATGGGATTGGAGCATCAGACTTTGGGGAACCATTGAGGTTCCAGAAGGTCTTGCAAGGTCAAGAAATTTTGGGTATTAATATTCCGTATGATGGTATTAGTGCTCAGAGTCACCCCTTTTCTGATATAAGGAGGTGCTATCCTGGTTCCAGTGTTCCTGGGATTGCTGCTTCAGGAAATAATTTCAGAATTTCACAAGTGCATTCTGATGTTCCGTGCAATGGCATAGGCTTCAATGAATCTTTTCGATTCCAGAAGGTCTTGCAAGGTCAAGAAATACTTCCAAGCCAACCATATGGAAGAGCTTTTTCTATTAATGATGTTCAAGTAAATGGCCGCTATGGAATATTCGACAGTTGTCGAATGCTGGGTCCCAGAACTGGATGGAGCACCTCAGTAGTACAGGATAATTCTGCCAATTTGCATCCTCCTTCTGTTCCATCTGGGCAAGTTTCATCTCCATCTTCTGTCTTCATGTTTCAGCAAGCAGTGAATCCTACACCCAACTGTGACTACAATAATAATAGCATTACAAATCAGCTGATGGAGCGTAGAATGCAACATCGAGGACTGCGTGTTTCTGAAATCAAAGGTGGAAAGTTTGCATCTGTCTCATCTTATGAGCCTGGTAGTTTCTGTGGGCAAACTCAGGGAAGAGCTAAATCTATTGGCATGTTTGAGCATAATGACCAAATGGACATTTCACCATCTCATGATTCTGTATCATCGCCGAGAGATGGTCAAGAGCTGATTTCCTCTTACAAGGGTAACTGCAGACTCTTTGGTTTTTCATTGACTCAGGAAAATCACATGGCAAATTGCAAATGA 2061 0.4474 MGLIDLNTTEEDETPSSGSSASLSSHSGISISASTSPSPSSVCLELWHACAGPMISLPKKGSIVVYFPQGHLEQQAQDFPVSAYNIPPHVFCRVADVKLHAEEGIDEVYCQVSLVPESEQAERRFREGEIDTDYEDEDAVAAVKSTTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYNQQRPSQELVAKDLHGLEWKFRHIYRGQPRRHLLTTGWSAFVNKKKLVSGDAVLFLRGEDGVLRLGIRRASQLKCGSNFSIPSGLHLNPSSFMDVVNAISTRSAFSVCYNPRVSSSEFIIPLNKFLKSLDQFYSVGMRFRMRFETEDASERRCAGLVIGISDADPARWPGSKWRCLTVRWEDLEGTRHNRVSPWEIEPSGSASNPNNFNAAGLKRTRIGLPSKQEFPVPNGIGASDFGEPLRFQKVLQGQEILGINIPYDGISAQSHPFSDIRRCYPGSSVPGIAASGNNFRISQVHSDVPCNGIGFNESFRFQKVLQGQEILPSQPYGRAFSINDVQVNGRYGIFDSCRMLGPRTGWSTSVVQDNSANLHPPSVPSGQVSSPSSVFMFQQAVNPTPNCDYNNNSITNQLMERRMQHRGLRVSEIKGGKFASVSSYEPGSFCGQTQGRAKSIGMFEHNDQMDISPSHDSVSSPRDGQELISSYKGNCRLFGFSLTQENHMANCK 686
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g1047 686 Pfam B3 DNA binding domain 151 252 IPR003340 GO:0003677
Mibi06g1047 686 MobiDBLite consensus disorder prediction 1 32 - -
Mibi06g1047 686 FunFam Auxin response factor 149 253 - -
Mibi06g1047 686 CDD B3_DNA 149 251 IPR003340 GO:0003677
Mibi06g1047 686 SMART B3_2 151 253 IPR003340 GO:0003677
Mibi06g1047 686 Gene3D - 149 252 IPR015300 -
Mibi06g1047 686 SUPERFAMILY DNA-binding pseudobarrel domain 144 257 IPR015300 -
Mibi06g1047 686 MobiDBLite consensus disorder prediction 9 32 - -
Mibi06g1047 686 Gene3D - 314 387 - -
Mibi06g1047 686 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 41 681 IPR044835 GO:0003677|GO:0006355|GO:0009725
Mibi06g1047 686 ProSiteProfiles B3 DNA-binding domain profile. 151 253 IPR003340 GO:0003677
Mibi06g1047 686 FunFam Auxin response factor 314 385 - -
Mibi06g1047 686 Pfam Auxin response factor 278 358 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g1047 Mibi-ChrMibi06 30290867 30295403 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi06g1047 38 515 B3 DNA Binding Superfamily AT5G60450 50.302 1.01e-143 436
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Mibi06g1047 B3 7.1e-22 CL0405
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi06g1047 06 30290867 30295403 Mibi06g1047 06 30290867 30295403 ECH