Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g1040 ATGGAGGCCGAGTCTGTTTCAGACGGCGGCGATAATAACCGGAAAAGGGATGTCGCTGATGATTACAATGACAACGATAATGGAAGTAACAAAAAAATTGTTAATTCCAATGAAGGTCAGAGCAAGCCCAAGCGTCAGATGAAGACTCCTTTCCAGCTTGATGCCCTAGAGAAAGCTTATGCTTTGGAGACATACCCATCGGAGGCGATGAGGGCAGAACTGTCACAAAAGTTGGGGTTGACAGATCGGCAATTGCAGATGTGGTTCTGCCATAGGAGGCTGAAAGATAAGAAGGATGTGCCTAAGTCTTCAAAAAAGGCGCCGGCACCGGCGCCGGCTTCCCCGACGGATGAGTTGAGGATGGAGGCTGAACTTGGCAATGATTATGGATCCGGGTCGGGTTCAGGCTCTAGCCCGTTTACCCGTTCAGAGTTGAGGAATGTAGCACCTAGGGGTGTTCCTGGGTACTATGAGTCTCAGCAGGCTCTTATGGAGCTCAGGGCAATTGCTTGTGTGGAGGCACAATTAGGAGAACCCTTAAGGGAGGATGGACCTGTTTTAGGAATTGAGTTTGATCCATTGCCGCCAGATGCATTTGGAGCACCTATAGCAGTTAATGAGCAGCAGAAGCGGCCTAGTATTGGCTTTGATAGTAAAGTCTATGAAAGACATGATGTTATATCAAATAAGGCTATGACAAGAACTTTCCATGAATATCCATTTCTCCCAAACCACTCCAGCATTAGATCTGATGCTTATGGACAATTGACACAATCTCATTTACTTGATCCGATTGATGGTCCGGCCAGAACTCCATCTTTTACAGTACAAAAAGAACAGCTCCCAAGGATTCATGCTGCCAAAGGTCATTCGTCTCGTGTTCGCGTTTCATCTCTACAAGATAAACAAGGGCTTCCCTTTTCATCTCCCCCTCCTGATGATGATGGCCCCGCTCAAAGAGAGTCTTACACAAACTTAAATATTGGAATGAACTCTCACTTTACTGATCACCCGATTGTTGGACCAGAAAACCCTTATTCTGTAATGGGTGGACAAATTATCCATGGTGATGCAATGGTAAGGGGGGACAGGAAACGCAAGAGTGATGATTCTAGAACTGCAAGAGAGGCTGAAGCCCATGAGTTGAGGATGCAGAAGGAGATGGAGAAACAAGATAACATTAGGCGAAAGAATGAAGAAAGAGTGAGGAAAGAGATGGAGAGGCAAGATCGTGAAAGAAGGAAGGAAGAAGAGAGGTTGGTGCGTGAGAGACAAAGAGAAGAAGAAAGAACAAAGCGTGAGCAAAAACGTGAAATTGAACGAAGGGAAAAGTTTATGATAAAAGAAAATTTAAGAGCTGAGAAAAGGAGGCAAAAAGAAGAGCTTCGGAAAGAGAAAGAAGCAGAGAGAAGGAAAGCTGCTCTTGAGAAGGCAGTTGCTCGCAGAATAGCTAAAGAATCTATGGAGCTTATTGAGGATGAACAACTTGAATTGATGGAGTTGGCTGTGGCAAGCAAGGGACTTACCTCAATCATAAATCTTGATCTTGACACTTTGCAAAACCTTGATATGTTTCGGGATTCCCTATGCATTTTTCCACCTAAAAGTTTAAAGCTGAAGAAACCATTTGCCATCCAACCCTGGATGAAATCTGAGGAGCATGTTGGCAACCTTCTCATGGTTTGGAGATTTCTGATTACATTTGCAGATGTCCTCGAGTTGTGGCCTTTTACTCTCGATGAGTTTTTGCAAGCATTTCATGACTACGATTCAAGATTATTTGGTGAGATACATGTTGCTCTTCTGAAGGTGATAATAAAGGACATTGAAGACGTTGCAAGGACACCTACAGGATTAGGTACAAACCAGAATGGGGCTGCTAATCCTGGGGGTGGCCATCCAGAGATTGTCGAAGGGGCATATGCATGGGGCTTTGATATAAGAAATTGGCAGAAGCACTTGAATCAATCAACATGGCCAGAAATTTTCCGACAGTTAGCCTTGTCTGCAGGGTTTGGACCGCGGCTGAAGAAAAGAAATGTCGCATGGTCATATGCAAATGATAAAGATGAGCAGGGTAGAAGTTGTGAAGACATCATCTCCACACTTCGCAATGGTTCGGCTGCTGAAAATGCAGTGGCAAAAATGCAAGAGAAAGGTCTATTAGCCCCTCGGAGAAATAGGCACCGGTTGACTCCTGGAACAGTCAAGTTTGCAGCATTTCATGTTTTGTCTCTAGAGGGTAGCAAGGGGTTGAATGTACTAGAGCTTGCAGAGAAAATTCAGAAATCTGGACTTCGGGACCTTACAACTAGCAAGACGCCTGAGGCATCAATTTCTGTCGCTTTGACTAGAGATGCTAAGCTTTTTGAAAGAATTGCTCCATCAACCTATCGTGTTCGAGCTGCTTATAGAAAAGATCCTGCTGATGCGGAGGCTATTCTCTCAGATGCTAGGAAGAAAATTCAGATTTTTGAAAATGGGTTTCCTGCTGTTGAAGATGCTGATGATGTTGAAAGAGAAGAAGAGTCAGAAAGTGATGAAGTTGACGAGGATCCTGAAGTAGATGATCTAGTAACTCCCCTAAGTGATAACAAAACACCTGAACAGTATGATGACCTGAACAATTGCTCTACAAATGGAAGAGAAAATATGAGCCATGACATGGAACTTATTCAAAATGAGTTTGGCAAGGATCTTCCTTGTGTTGCTGAAAATTGTTCCAAGGATGCTGATTGCCCAAGTTCTGTCACCGGACAACGGGTTGTTGTTGAAGATTTGAGTACTGGAAAGCCTGAAGATAATATGGAAATTGATGAAAGCAAGTCTGGAGAGTCATGGGTTCAAGGTCTTACAGAAGGAGAATATTCTGACCTTAGTGTAGAAGAACGTCTTAATGCTCTAGTGGCGTTAGTTGGTATTGCAAATGAAGGAAACTCAGTACGTCTTGTTCTTGAGGACCGTTTGGAGGCAGCAAATGCTCTGAAGAAGCAAATGTGGGCAGAAGCACAGATAGATAAAGTTCGGCAGAAAGATGATAATTCTACTAAATTCGATTTTCCATCTCTTACCGCAAATAAAGTTGAGACTCAATTCACAGGCCCTGCTGTAGAGGGAAACCAGAGCCCATTGCCTGACATCAATATTAATAATAATGAGGCATCACCCAGCACTGCAGAAAATCAGAAAGAAGTTCTTGCTTCACAGAACATGCCTATTGAAAAGCCCTCAATTGTTCAAGATTTCTTTTTAGGTCCAGACAACCTGCAGATTCTATCTGCACATGCTTCAAAAAGGTCTCGTTCACAGTTGAAGTCCTATATTGCACATATAGCAGAAGAGATGTATGTATATAGGTCCTTGCCCCTTGGTCAAGATCGGAGACGTAATCGATATTGGCAATTCGTTGCATCTGCTTCCAGCAGTGATCCTGGTGCTGGTAGGGTCTTTGTTGAATTACATGATGGCAGTTGGAGGCTTATTGATTCTGAAGAGGATTTTGATGCACTTTTGAAATCCCTCGATTCACGGGGAATCAGGGAATCTCATTTGCGCTTAATGTTGCAGAAGATTGAGAGTTCCTTCAAGGAAAATGTTCGAAAGAATGCTAAATTTTATAAAACTGCTACCAAATCAGTTAAGAATGAAGCTGATGAAGTTGAATTGGTTCCTGAATGCCGTGCTGGATCAGACAGTTCTAGCAGTACTCTCTGTGGTTTGAATTCTGACAGTACATTGGAAACTTCGTCTTCCTTTAAAATTGAGTTGGGGAGAAGTGAGAGTGACAAAAAAGCTGCTTTGACTAGGTATCAAGATGTTCAAAAGTGGATATGGAAAGAATGTTATAATTCATCAACATTATATTCAATGAAATATGGGCAAAGGAGATGCAAACCACTGCTGGAAATATGTGATATGTGTTTGAATCCATATTTCTATGAAGATTTCCATTGTAATTCTTGCCACCATAGTTTTGCTGCTAATAATGGGGTTAATTTTTCTAAACACGCATTTCAATGTGGAGAGAAGGTAGATTCCAAAGGTAATTATACTTGGGATTCTTCTCTTCCCTTGCGGATAAGGTTGCTCAAGGCCCTGTTGGCTTGTATTGAGGCTTCCGTTCCTCTTGAAGCATTACAATCAAGTTGGACAGAAGAGAAGAGGAAGCAGTGGGGATTGAAGTTGAGCAAATCATCTACAGCTGATGAATTCTTGCAGTTATTGACCTTGTTGGAGAGAGCCGTACAGCGAGACTTTCTGTCATCAAACTTCTCTACAACAGAAGAAATGTTGGGTTCAAGCTGTATGCCAGATGATGCTGTAAATACTTCTATTGACACTGAATCAGTTCCTGTGCTGCCATGGGTACCACAGACCACTGCAGCTATGTCATTGAGAATCTTTGAGTTTGATGCATCCGTCAGTTACATACTGGTTGAGAAACCTGAGCTACCTGGTGAGGAGAAAGAAGTGAGGGAATATGTGAAGCTTCCTTCAAGATATGCTCCCTTCAAATCTGGTAGAGCTATTGAATCAGCAGAATTGGACCATGATGAATTTATCAAGGAAGACAAATCTAATAAAAGTGTTCGCAGCAGCAACAAACGTGGACGAGGGTCTCATGATCAGGGGCGGGGCAAAAAGTTGTCTAGAAGAACACAAGAGCCAAAACAACATAATGGGCGTCGAAATGGTAAAGGCGCATATAGTTTGGGTCAAGGATTAAAACAGCATGGAAGAGGGACACAAGGTCAACCTGGTGGGCGTGGTCGCCGAACAGTAAGGAAAAGAAGAGTTGAAAAAAGGGCCGTTGAGGACTTATTGCTGGGCCACAAGGGTGTCAGCCGAAGTCCCAAAATTGGCAGAGAATCATTGAGAGTTTTGGAAGAGGAATGGGATGGCGAGAAGGAATCAAGTCCCATCCAAATGGATGGTGCTGATGATAATAGTAACAGTGCTGAGGAAGTGGAATCTGATGACAATGGGCAAGCAGTGGAGTATGAGCAAGGGAACTGGGAGGTTGGTTTCAATGGTGATAATTCTAACAGATGGGATAGGGATTTGGTTGGAGGGAGCGATGAGGAATTGGTGGGTGCTTCTGAAGATGACAATGGCATAGAAGAGGGAGAAGAGGAGTTGGAAGAAGATTCAGAGGAAGAGGTCATGAGTGAGGGAGAGGATTCAGATGGTGGTGAGGGTAATAGAATGATGGTAAATGAAGAAGGCTCAGACTCACCTGTCTCTGAGGATTCTTCTGAGTAG 5262 0.432 MEAESVSDGGDNNRKRDVADDYNDNDNGSNKKIVNSNEGQSKPKRQMKTPFQLDALEKAYALETYPSEAMRAELSQKLGLTDRQLQMWFCHRRLKDKKDVPKSSKKAPAPAPASPTDELRMEAELGNDYGSGSGSGSSPFTRSELRNVAPRGVPGYYESQQALMELRAIACVEAQLGEPLREDGPVLGIEFDPLPPDAFGAPIAVNEQQKRPSIGFDSKVYERHDVISNKAMTRTFHEYPFLPNHSSIRSDAYGQLTQSHLLDPIDGPARTPSFTVQKEQLPRIHAAKGHSSRVRVSSLQDKQGLPFSSPPPDDDGPAQRESYTNLNIGMNSHFTDHPIVGPENPYSVMGGQIIHGDAMVRGDRKRKSDDSRTAREAEAHELRMQKEMEKQDNIRRKNEERVRKEMERQDRERRKEEERLVRERQREEERTKREQKREIERREKFMIKENLRAEKRRQKEELRKEKEAERRKAALEKAVARRIAKESMELIEDEQLELMELAVASKGLTSIINLDLDTLQNLDMFRDSLCIFPPKSLKLKKPFAIQPWMKSEEHVGNLLMVWRFLITFADVLELWPFTLDEFLQAFHDYDSRLFGEIHVALLKVIIKDIEDVARTPTGLGTNQNGAANPGGGHPEIVEGAYAWGFDIRNWQKHLNQSTWPEIFRQLALSAGFGPRLKKRNVAWSYANDKDEQGRSCEDIISTLRNGSAAENAVAKMQEKGLLAPRRNRHRLTPGTVKFAAFHVLSLEGSKGLNVLELAEKIQKSGLRDLTTSKTPEASISVALTRDAKLFERIAPSTYRVRAAYRKDPADAEAILSDARKKIQIFENGFPAVEDADDVEREEESESDEVDEDPEVDDLVTPLSDNKTPEQYDDLNNCSTNGRENMSHDMELIQNEFGKDLPCVAENCSKDADCPSSVTGQRVVVEDLSTGKPEDNMEIDESKSGESWVQGLTEGEYSDLSVEERLNALVALVGIANEGNSVRLVLEDRLEAANALKKQMWAEAQIDKVRQKDDNSTKFDFPSLTANKVETQFTGPAVEGNQSPLPDININNNEASPSTAENQKEVLASQNMPIEKPSIVQDFFLGPDNLQILSAHASKRSRSQLKSYIAHIAEEMYVYRSLPLGQDRRRNRYWQFVASASSSDPGAGRVFVELHDGSWRLIDSEEDFDALLKSLDSRGIRESHLRLMLQKIESSFKENVRKNAKFYKTATKSVKNEADEVELVPECRAGSDSSSSTLCGLNSDSTLETSSSFKIELGRSESDKKAALTRYQDVQKWIWKECYNSSTLYSMKYGQRRCKPLLEICDMCLNPYFYEDFHCNSCHHSFAANNGVNFSKHAFQCGEKVDSKGNYTWDSSLPLRIRLLKALLACIEASVPLEALQSSWTEEKRKQWGLKLSKSSTADEFLQLLTLLERAVQRDFLSSNFSTTEEMLGSSCMPDDAVNTSIDTESVPVLPWVPQTTAAMSLRIFEFDASVSYILVEKPELPGEEKEVREYVKLPSRYAPFKSGRAIESAELDHDEFIKEDKSNKSVRSSNKRGRGSHDQGRGKKLSRRTQEPKQHNGRRNGKGAYSLGQGLKQHGRGTQGQPGGRGRRTVRKRRVEKRAVEDLLLGHKGVSRSPKIGRESLRVLEEEWDGEKESSPIQMDGADDNSNSAEEVESDDNGQAVEYEQGNWEVGFNGDNSNRWDRDLVGGSDEELVGASEDDNGIEEGEEELEEDSEEEVMSEGEDSDGGEGNRMMVNEEGSDSPVSEDSSE 1753
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g1040 1753 CDD homeodomain 44 98 IPR001356 GO:0003677
Mibi06g1040 1753 ProSiteProfiles HARE-type HTH domain profile. 734 803 IPR007759 GO:0006355
Mibi06g1040 1753 MobiDBLite consensus disorder prediction 358 436 - -
Mibi06g1040 1753 MobiDBLite consensus disorder prediction 28 47 - -
Mibi06g1040 1753 Coils Coil 377 397 - -
Mibi06g1040 1753 SMART testlast3 552 611 IPR018501 -
Mibi06g1040 1753 MobiDBLite consensus disorder prediction 1696 1727 - -
Mibi06g1040 1753 Pfam HB1, ASXL, restriction endonuclease HTH domain 734 802 IPR007759 GO:0006355
Mibi06g1040 1753 MobiDBLite consensus disorder prediction 1616 1642 - -
Mibi06g1040 1753 MobiDBLite consensus disorder prediction 835 858 - -
Mibi06g1040 1753 MobiDBLite consensus disorder prediction 831 876 - -
Mibi06g1040 1753 MobiDBLite consensus disorder prediction 284 436 - -
Mibi06g1040 1753 ProSiteProfiles 'Homeobox' domain profile. 39 99 IPR001356 GO:0003677
Mibi06g1040 1753 Pfam Homeodomain 42 98 IPR001356 GO:0003677
Mibi06g1040 1753 Coils Coil 399 442 - -
Mibi06g1040 1753 Pfam WSTF, HB1, Itc1p, MBD9 motif 1 943 983 IPR028942 -
Mibi06g1040 1753 MobiDBLite consensus disorder prediction 7 27 - -
Mibi06g1040 1753 MobiDBLite consensus disorder prediction 1521 1562 - -
Mibi06g1040 1753 Pfam DDT domain 553 608 IPR018501 -
Mibi06g1040 1753 SUPERFAMILY Homeodomain-like 31 98 IPR009057 -
Mibi06g1040 1753 MobiDBLite consensus disorder prediction 96 118 - -
Mibi06g1040 1753 MobiDBLite consensus disorder prediction 1 51 - -
Mibi06g1040 1753 Pfam Williams-Beuren syndrome DDT (WSD), D-TOX E motif 1119 1191 IPR028941 -
Mibi06g1040 1753 Coils Coil 445 479 - -
Mibi06g1040 1753 SMART HOX_1 41 103 IPR001356 GO:0003677
Mibi06g1040 1753 PANTHER HOMEOBOX-DDT DOMAIN PROTEIN RLT2 27 1752 IPR044977 GO:0006357
Mibi06g1040 1753 Gene3D - 26 101 - -
Mibi06g1040 1753 ProSiteProfiles DDT domain profile. 552 611 IPR018501 -
Mibi06g1040 1753 MobiDBLite consensus disorder prediction 1521 1753 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g1040 Mibi-ChrMibi06 30149514 30158801 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi06g1040 7 1679 Homeobox Transcription Factor Family AT1G28420 48.993 0.0 1355
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-other Mibi06g1040 WSD 9.8e-15 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi06g1040 06 30149514 30158801 Mibi06g1040 06 30149514 30158801 CCT
Mibi06g1040 06 30149514 30158801 Mibi06g1040 06 30149514 30158801 ECH