Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g1022 ATGGCTTCTCCTTCTCCTTCTCCTTCTCCTTCAATGTCTCGGGAGGGGCAGGGGCACTACAGAGGAGTAAGGAAGAGACCATGGGGGAGATACGCGGCGGAGATTCGGGACCCCTGGAAGAAAACTCGAGTCTGGCTGGGCACCTTCGACACCCCTGAGGAAGCCGCCTTGGCCTACGACGGAGCCGCCCGCTCCCTCCGTGGCCCCAAGGCCAAGACCAACTTCCCTCCCCCCGCCCCCCTCTCCCTCGACCTCAACGCCCCCTCCTCCGCCGACCACCACCACCGCTGGCCTCCCATCCCCTCCGGCCGCCTCGTCCTCAACGAGCTCCTCCATGCCGGCCTCCTCAACCCCTCCCCTCCCCCTCCCCCTCCCATTCCCCTCCTTCACACCCGTCGTGACTCTCCTCCCTCCCTCGACGGCGCCTCCCCTCAACAGCCCCCGGAATCCTCCTCCACCGCTTCCTTCCTCGGTCTCGTCCGGCGAGGCCTCCCCATCGACCTCAATGAACCTCCTCCGCTGTGGCCTTGA 531 0.6667 MASPSPSPSPSMSREGQGHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGPKAKTNFPPPAPLSLDLNAPSSADHHHRWPPIPSGRLVLNELLHAGLLNPSPPPPPPIPLLHTRRDSPPSLDGASPQQPPESSSTASFLGLVRRGLPIDLNEPPPLWP 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g1022 176 SMART rav1_2 19 82 IPR001471 GO:0003700|GO:0006355
Mibi06g1022 176 Pfam AP2 domain 19 68 IPR001471 GO:0003700|GO:0006355
Mibi06g1022 176 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 13 130 - -
Mibi06g1022 176 Gene3D AP2/ERF domain 19 77 IPR036955 GO:0003700|GO:0006355
Mibi06g1022 176 PRINTS Ethylene responsive element binding protein signature 42 58 IPR001471 GO:0003700|GO:0006355
Mibi06g1022 176 PRINTS Ethylene responsive element binding protein signature 20 31 IPR001471 GO:0003700|GO:0006355
Mibi06g1022 176 MobiDBLite consensus disorder prediction 1 27 - -
Mibi06g1022 176 CDD AP2 19 76 IPR001471 GO:0003700|GO:0006355
Mibi06g1022 176 MobiDBLite consensus disorder prediction 67 96 - -
Mibi06g1022 176 FunFam Ethylene-responsive transcription factor 2 19 77 - -
Mibi06g1022 176 MobiDBLite consensus disorder prediction 138 156 - -
Mibi06g1022 176 MobiDBLite consensus disorder prediction 113 156 - -
Mibi06g1022 176 SUPERFAMILY DNA-binding domain 19 77 IPR016177 GO:0003677
Mibi06g1022 176 MobiDBLite consensus disorder prediction 116 131 - -
Mibi06g1022 176 ProSiteProfiles AP2/ERF domain profile. 19 76 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g1022 Mibi-ChrMibi06 29950546 29951076 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi06g1022 9 175 AP2-EREBP Transcription Factor Family AT1G28360 50.500 1.62e-45 146
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mibi06g1022 AP2 1.5e-14 CL0081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi06g1022 06 29950546 29951076 Mibi06g1022 06 29950546 29951076 ECH