Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mibi06g1018 | ATGGAATGTGAGAGTCAAGAGAGGAACTTGATGCTAGTTTCTTCTGTGGCAGTAAACCCTGATACAGTGCCTGCAGAGAATAATGACTCATATATGGTTCTTACAATGGAAAAAGAAGATTTGCAGCTGGAACATGTGACTCAAAGTAGTCCAAATTCAAGAAATAATGTAGCTACTGCTGAAGATGATAAACATCAAGGGTTAGATGTTGCTAATGAAAGTAATGGATCCCCTTTACAATGTAAAATCTTGGAAGCATGTAATGAACCAAGTTGTGATAGCAAAGCTTACTTATGTGCTGCTAAAGAATCTGGGACAGTCAAGTCATCCAGTGATGCTGAAAAAGATGTGGATATTGACATCCAGCAGAGAGGTTGCTCTGTTGAGGATGCTAACATTGGCACTCAGAATTCTATAGACAAAATAAAGCAATTGGACATGCATTCAGGGGATGAAATGAAGCAAATGACATCAAGATTTACTTCCCCTGATACGAGGACTCTCAGTCTTTCTCCCAGTGCTGAGATTAAAGATATAAATAAAAGGCCAGCAATTATATGCAGCTTTTTTGCTAAAGGATGGTGCATCAGAGGTAGTTCATGTAGGTTTCTTCATATCAAAGATAATGTAAATAATACCGGCCATCAGGCTGAAGGAGATTTGGTTTCTACTAATCTGAAGAGAGAAAAGCAATCAGAGGAAGGTCTGAGAGGTAATGCAGAGACATCAGGAATGCCTGATGCTGCAGTTCCATTGGCTGCTTCATTAGTGAGCTCTTCGTTGCATTCTTCTGAATTTTCTGTGAAAAAGACCACCCAGGACGAACCAGAAGCAAGCCCGAGTCATCATCCACCTCAAGATAAACTAAAGTCTCCTTCACTTTCAAAAGAGGATTTATTACCAATTGGTAGAGACAGTTCTGCATCAAGGGATGGCTTAATTCCAGAAAATAGATATATTTTTAATGCGCCAGACATCTATTTTAGCAGGAATCTTTCTTCTTATCCATCCTATGTGGAGAAATATACTTCCCAAGTTTCAGCTCCATCAAGTTATTCAATGTCTTCGAATTTATCTATTGGTGCAAGTACTTTGGATGCTCAAAAGTTGTTGAAAAGTGGCAAAGAATATCATGCCCCTAGATCAACTTTCTTGGGTTCGGGATGTGGGGAGTTGCCTCTAACTGGTTCATCTAGAGTTTGGCTACACGCCACTGGATATAAAAGAAAAATAACTTCTTATGATTGGGAGCCATCTGTACCTTTCCGACCGTCTTTTTTTATTACTTCAGCCGGTATGTCATCTTCTGAAGATATGTACGACCCATTTCATCCTTGTGTTGAGGTAACCAATATAGGAGATGGATCCCTGAAAGCTTCCATTTTTATTGACGGGCCTCCTGTCCAGGCTTCATCTCAGTTGCAAACCTATGGTGATTGTGCTGTAGCTGGGGACAAGGTGGTAGATATTAACGATGACAAGAGTTCTGTATCTTCTCATCACAGATTTAATGAGAATGAGGTAAACAAGAGCTGTGCTCCTTCAGAAAAAGATGATTTTGCACATGGAATGGAGACAACAGCCAGAACCAATCTAAACTCCCATAATGGTAAAGCAAGCATCGGAGAAAATACCGTTGCTGTTGAAGATAATACAAAAACTGAAGTTGAACAAACAGAGAATGATTCAAGATATCGAGGTGAAGGATCAGAACCAAAAAAGAGAAGAGTAGATAAGGCTCGGAAAAAAAATGAAATTAATTTTGATTTTCAGATGGACTGCAATCTGCGGAATGATTCGAAGGCTCTAAAAGTTTTTCGTACAGCTCTTGTAGATTTAGTGAAAGAGTTGTTAAAACCATCTTGGCAAGAGGGTCATCTCAGCAAGGATGCACATAATACAATAGTTAAAAAATCAGTTGACAAAGTTATTAACACCCTACAACCCCACCAGATTCCAACCACCATAGATGCAGTCAACCACTATGTTTCTTCATCTCGGTTGAAAATCGGAAAGCTTGTTGATGTAAGTGCCATCTCGTCTTTGTAG | 2049 | 0.3943 | MECESQERNLMLVSSVAVNPDTVPAENNDSYMVLTMEKEDLQLEHVTQSSPNSRNNVATAEDDKHQGLDVANESNGSPLQCKILEACNEPSCDSKAYLCAAKESGTVKSSSDAEKDVDIDIQQRGCSVEDANIGTQNSIDKIKQLDMHSGDEMKQMTSRFTSPDTRTLSLSPSAEIKDINKRPAIICSFFAKGWCIRGSSCRFLHIKDNVNNTGHQAEGDLVSTNLKREKQSEEGLRGNAETSGMPDAAVPLAASLVSSSLHSSEFSVKKTTQDEPEASPSHHPPQDKLKSPSLSKEDLLPIGRDSSASRDGLIPENRYIFNAPDIYFSRNLSSYPSYVEKYTSQVSAPSSYSMSSNLSIGASTLDAQKLLKSGKEYHAPRSTFLGSGCGELPLTGSSRVWLHATGYKRKITSYDWEPSVPFRPSFFITSAGMSSSEDMYDPFHPCVEVTNIGDGSLKASIFIDGPPVQASSQLQTYGDCAVAGDKVVDINDDKSSVSSHHRFNENEVNKSCAPSEKDDFAHGMETTARTNLNSHNGKASIGENTVAVEDNTKTEVEQTENDSRYRGEGSEPKKRRVDKARKKNEINFDFQMDCNLRNDSKALKVFRTALVDLVKELLKPSWQEGHLSKDAHNTIVKKSVDKVINTLQPHQIPTTIDAVNHYVSSSRLKIGKLVDVSAISSL | 682 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mibi06g1018 | 682 | Pfam | Zinc finger C-x8-C-x5-C-x3-H type (and similar) | 186 | 205 | IPR000571 | GO:0046872 | |
Mibi06g1018 | 682 | SUPERFAMILY | CCCH zinc finger | 181 | 205 | IPR036855 | GO:0046872 | |
Mibi06g1018 | 682 | MobiDBLite | consensus disorder prediction | 212 | 245 | - | - | |
Mibi06g1018 | 682 | MobiDBLite | consensus disorder prediction | 268 | 294 | - | - | |
Mibi06g1018 | 682 | PANTHER | PROTEIN FRIGIDA-ESSENTIAL 1 | 52 | 674 | - | - | |
Mibi06g1018 | 682 | MobiDBLite | consensus disorder prediction | 496 | 516 | - | - | |
Mibi06g1018 | 682 | MobiDBLite | consensus disorder prediction | 529 | 552 | - | - | |
Mibi06g1018 | 682 | MobiDBLite | consensus disorder prediction | 529 | 580 | - | - | |
Mibi06g1018 | 682 | Gene3D | - | 177 | 293 | - | - | |
Mibi06g1018 | 682 | SMART | c3hfinal6 | 181 | 207 | IPR000571 | GO:0046872 | |
Mibi06g1018 | 682 | MobiDBLite | consensus disorder prediction | 553 | 575 | - | - | |
Mibi06g1018 | 682 | MobiDBLite | consensus disorder prediction | 265 | 308 | - | - | |
Mibi06g1018 | 682 | MobiDBLite | consensus disorder prediction | 222 | 236 | - | - | |
Mibi06g1018 | 682 | ProSiteProfiles | Zinc finger C3H1-type profile. | 181 | 208 | IPR000571 | GO:0046872 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Mibi06g1018 | Mibi-ChrMibi06 | 29913265 | 29915561 | Wgd |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | C3H | Mibi06g1018 | zf-CCCH | 6.1e-06 | CL0537 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Mibi06g1018 | 06 | 29913265 | 29915561 | Mibi06g1018 | 06 | 29913265 | 29915561 | ECH |