Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g1013 ATGGAAAGAAGCGGAGAGGGAAAGAGGAGCTTCAAGTACAAAGTGGAGGAAGAGGAAGAGATTGAAGATGAAGAAGAAGATGAAGAAGAAGTTGAAGAGTTCAATTTAGGAGTGGAAGAGGGGAGGAAGAAGATGAGAGATCTGACCAATAGCAAGAGAGGTTCTTCTTCTTCTTCTTCAATGGTGCCTTCATGTCAGGTGGAAGGGTGTGAGAGTGATCTGAGTGAGGCTAAGCACTACCATCGCCGCCATAAGGTTTGTGAGTTCCATGCCAAGGCTACTTCTGTCCTCATTTCTGGCTTGCACCAAAGGTTCTGCCAACAATGCAGCAGGTTCCATGAGCTGGGGGAATTTGATGATTCCAAGAGGAGCTGTAGGAAGCGTTTGGCTGGACACAATGAAAGGCGTCGAAAGAATGCATCTTAA 426 0.4648 MERSGEGKRSFKYKVEEEEEIEDEEEDEEEVEEFNLGVEEGRKKMRDLTNSKRGSSSSSSMVPSCQVEGCESDLSEAKHYHRRHKVCEFHAKATSVLISGLHQRFCQQCSRFHELGEFDDSKRSCRKRLAGHNERRRKNAS 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g1013 141 Coils Coil 14 34 - -
Mibi06g1013 141 SUPERFAMILY SBT domain 63 139 IPR036893 GO:0003677|GO:0005634
Mibi06g1013 141 MobiDBLite consensus disorder prediction 17 35 - -
Mibi06g1013 141 Pfam SBP domain 65 138 IPR004333 GO:0003677
Mibi06g1013 141 ProSiteProfiles Zinc finger SBP-type profile. 62 139 IPR004333 GO:0003677
Mibi06g1013 141 MobiDBLite consensus disorder prediction 36 50 - -
Mibi06g1013 141 MobiDBLite consensus disorder prediction 1 64 - -
Mibi06g1013 141 MobiDBLite consensus disorder prediction 1 16 - -
Mibi06g1013 141 FunFam Squamosa promoter-binding-like protein 14 56 126 - -
Mibi06g1013 141 Gene3D - 60 126 IPR036893 GO:0003677|GO:0005634
Mibi06g1013 141 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 44 140 IPR044817 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g1013 Mibi-ChrMibi06 29864712 29866680 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi06g1013 48 141 SBP-box Gene Family AT2G33810 68.085 1.68e-42 135
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Mibi06g1013 SBP 2e-33 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi06g1013 06 29864712 29866680 Mibi06g1013 06 29864712 29866680 ECH
Mibi01g0669 01 6418145 6418851 Mibi06g1013 06 29864712 29866680 ECH