Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g1009 ATGTTTGACAATTCCTCTCACCTTTTGAATAACCCAAATCCTCTCTTCACTACTGAGTCTCCTTCCATGGCTGCATCTTCTGCAGCTCTCAATTCCCTCTCATCTCTCTCCCTTCCCTCTTCTTCCCGCTTCTCTCTCTTCCCCACCACCAAATTCACCTCCTTTTCTCTCCTCCCCAAAACCCCACAACCATTTCTCTCAATCCCATCACCCCCCATTATCCCCACACCCAAATCCACCTCCTCCGGTGACATCGACACCTCCTTCTTCGACAATGTCAGGCCAGAAGAAGACATTCCCTTCAACCCACCTGAGCCCCCCGAAGGCTTCATCGCCCCTCCTCCCGTTGACGACGGTCCCATGGAGACCGAAGAAGAAATCGCCGCCGCTTATGAAGAACTTTATGGACCTGCATACAGTGGTGTCTCTGTTCTTGGCAACGATGTGCAAGTAATGGACTCCAAGGTGAAAAAAGATACTGGCTTTGGCTCCAAGGGGAAGAAAGATAAGGTTAAGGATGGGTTTGAAGAAAGGGTTGTTCAGGTTAGAAGGGTGACTAAGGTTGTAAAAGGAGGGAAGCAATTGCATTTCAGGGCAATTGTGGTTGTGGGTGACAAGAAAGGCCAAGTGGGTGTGGGAGTTGGGAAAGCCAAGGAGGTTATTGGAGCAGTTCAGAAATCTGCTGTAAATGCAAGGAGGAATGTCATCACAGTGCCTATGACTAAGTACCTGACTTTCCCACATAGATCGGAGGGAGATTATGGAGCAGCAAAGGTGATGCTTAGACCTGCTACACCTGGTACTGGAGTTATCGCTGGTGGGTCAGTGAGAATTGTTCTAGAAATGGCAGGCGTTGAGAATGCTTTGGGAAAGCAACTAGGGAGCAATAATGCCCTCAACAATGCCAGAGCAACAGTTGTTGCCGTGCAGAAAATGAGGCAGTTCCGTGAAGTTGCTGAGGAGCGAGGTATTCCAATGGAAGAACTATGGAAGTGA 996 0.49 MFDNSSHLLNNPNPLFTTESPSMAASSAALNSLSSLSLPSSSRFSLFPTTKFTSFSLLPKTPQPFLSIPSPPIIPTPKSTSSGDIDTSFFDNVRPEEDIPFNPPEPPEGFIAPPPVDDGPMETEEEIAAAYEELYGPAYSGVSVLGNDVQVMDSKVKKDTGFGSKGKKDKVKDGFEERVVQVRRVTKVVKGGKQLHFRAIVVVGDKKGQVGVGVGKAKEVIGAVQKSAVNARRNVITVPMTKYLTFPHRSEGDYGAAKVMLRPATPGTGVIAGGSVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMRQFREVAEERGIPMEELWK 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g1009 331 FunFam 30S ribosomal protein S5 240 331 - -
Mibi06g1009 331 ProSiteProfiles S5 double stranded RNA-binding domain profile. 175 238 IPR013810 GO:0003723|GO:0003735|GO:0005840|GO:0006412
Mibi06g1009 331 ProSitePatterns Ribosomal protein S5 signature. 192 224 IPR018192 -
Mibi06g1009 331 Hamap 30S ribosomal protein S5 [rpsE]. 152 328 IPR005712 GO:0003735|GO:0006412|GO:0015935
Mibi06g1009 331 SUPERFAMILY dsRNA-binding domain-like 171 240 - -
Mibi06g1009 331 SUPERFAMILY Ribosomal protein S5 domain 2-like 245 323 IPR020568 -
Mibi06g1009 331 PANTHER RIBOSOMAL S SUBUNIT 162 330 IPR000851 GO:0003723|GO:0003735|GO:0005840|GO:0006412
Mibi06g1009 331 TIGRFAM rpsE_bact: ribosomal protein uS5 173 328 IPR005712 GO:0003735|GO:0006412|GO:0015935
Mibi06g1009 331 Gene3D - 242 330 IPR014721 -
Mibi06g1009 331 Pfam Ribosomal protein S5, C-terminal domain 252 322 IPR005324 GO:0003735|GO:0005840|GO:0006412
Mibi06g1009 331 Gene3D - 166 236 - -
Mibi06g1009 331 Pfam Ribosomal protein S5, N-terminal domain 175 239 IPR013810 GO:0003723|GO:0003735|GO:0005840|GO:0006412
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi06g1009 175 315 Cytoplasmic Ribosomal Protein Gene Family AT2G41840 31.544 1.22e-14 71.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi06g1009 06 29795648 29799710 Mibi06g1009 06 29795648 29799710 ECH