Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g1001 ATGGAGAAGGTTCCATGTCCTAATTCGTCAAGAGAAGGAGATAGGAAAGTGATAGAGAGAAACCGAAGAAGCCAAATGAGGGCTCTTTACTCCAAACTCAACTCACTCCTCCCTCATCAATCGTCAAGGGAAGTGATTTCTGTGCCGGATCAGCTGGGTGAAGCTACCGACTACATAAAAAAGCTTCAGATAAGGTTGGAGAAGATGAAGGATAAGAAACTCACACTTGTGGGGGCAGAAAATAATAGAAATTCTAGTAATGAGAGCTTAATCAACAATAATAGAGGGATCATTTTTAAGGGGTCAAAATCTCCCAAAGTTGAGATTCATCAAATGGGTTCCGCATTAAGCGTTTCTGTGATTACAGCCTTGGATTGCCAATTCATATTCAATGATGTCATTCGCATTCTTCATGAAGAACAAGCTGATATTGTTAACGCCAGTTATTCTGTCCTTCAAGATGCTGTTTTTCATACCATTCACTGTCAGATAGGAGAATATGGTAATTGTGCTGAGAGGATAACGGAGAGATTGAAGAGATTTGTGTATGGTTCTGCTGCTTTTTGA 567 0.4004 MEKVPCPNSSREGDRKVIERNRRSQMRALYSKLNSLLPHQSSREVISVPDQLGEATDYIKKLQIRLEKMKDKKLTLVGAENNRNSSNESLINNNRGIIFKGSKSPKVEIHQMGSALSVSVITALDCQFIFNDVIRILHEEQADIVNASYSVLQDAVFHTIHCQIGEYGNCAERITERLKRFVYGSAAF 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g1001 188 Pfam Helix-loop-helix DNA-binding domain 15 63 IPR011598 GO:0046983
Mibi06g1001 188 SMART finulus 16 68 IPR011598 GO:0046983
Mibi06g1001 188 Coils Coil 52 72 - -
Mibi06g1001 188 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 12 183 IPR015660 -
Mibi06g1001 188 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 10 62 IPR011598 GO:0046983
Mibi06g1001 188 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 14 74 IPR036638 GO:0046983
Mibi06g1001 188 Gene3D - 8 92 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g1001 Mibi-ChrMibi06 29714288 29715386 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi06g1001 10 182 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G20970 44.318 1.15e-44 144
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mibi06g1001 HLH 7.1e-08 No_clan