Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g1000 ATGATGGAGAAGGTTCCAGCTGGTACTTCTTCTAGGTGCGATAGAAAAGTGATAGAGAGGAATCGAAGAAGCCAAATGAGGGCTCTTTGCTTTAAGCTCAGCTCACTCGTCCCTCATCAATCCTCCAGGGAGGTGATTTCGCTGCAGGATCAGCTGGGTGAAGCCACAAACCACATAAAGAAGCTTCAGATAAAGTTGGAGAGGATGAATGAGAAGAAACTCAGCCTCATGGGAATCAATAATAATGAGCCAAATATCACTAGTGGGAGCCTAATTAGTCACAATAATAATAGAGGAATCATTAAGGGGTCGAAATCGCCTAAAGTTGAGATTCACCAAATGGACTCAACATTAACTGTTTCTGTGATAACTGGGTTGGATTGCCAGTTCATATTCAACGAGTTCATTCGCATTCTTCATGAAGAACAGGCTGTCATTGTTAACGCCAGTTATTCGGTCGTTCAAGATATTGTTATTCATACTATTCACTGTCAGATTGGAGAATGTGGTGACAGAGCTGGGAGGATATCCGAGAGATTAAAGAGGTTTGTGTATGGTTCTGGTTCATCATTCGAAGACAATGGAAATGGCTGCACTATTTTGTGGAGTTCTGACGAGTTACTATGTGAATAA 633 0.4171 MMEKVPAGTSSRCDRKVIERNRRSQMRALCFKLSSLVPHQSSREVISLQDQLGEATNHIKKLQIKLERMNEKKLSLMGINNNEPNITSGSLISHNNNRGIIKGSKSPKVEIHQMDSTLTVSVITGLDCQFIFNEFIRILHEEQAVIVNASYSVVQDIVIHTIHCQIGECGDRAGRISERLKRFVYGSGSSFEDNGNGCTILWSSDELLCE 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g1000 210 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 9 75 IPR036638 GO:0046983
Mibi06g1000 210 Coils Coil 45 72 - -
Mibi06g1000 210 Pfam Helix-loop-helix DNA-binding domain 15 63 IPR011598 GO:0046983
Mibi06g1000 210 Gene3D - 7 85 IPR036638 GO:0046983
Mibi06g1000 210 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 10 62 IPR011598 GO:0046983
Mibi06g1000 210 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 13 185 IPR015660 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g1000 Mibi-ChrMibi06 29699984 29701369 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi06g1000 7 184 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G20970 41.436 8.81e-37 125
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mibi06g1000 HLH 1.2e-05 No_clan