Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g0998 ATGGACAACATTCCAGCTTCTTCATCATGCGGAGGAGGAGACAGAAAAGTGATAGAGAGAAACCGAAGAAGCCAAATGAGATCTCTTTGCTCCCACCTCACCTCACTCATCATCCCTCCTCCTTCCTCTTCATCATCACCATCGGTATATGAGGTGATTTCGCTTTCAGATCAGCTGAGTGAAGCTACTACCTACATCAAGAAGCTTCAGATTAAGTTGGAGAAGATGAAGGAGAAGAAACTCAGCCTAATGGGAATCAACAACGAGCCAAACACTACTAGTAGTAGGAGTCTAGCAAATAATAATAATAGAGGAATCATTATGGGATCCAAATCACCCCAAGTTGAGATTTGCCATATGGGCTCAACGTTGGAGGTTTCTGTAATTACTGGCTTGGATTGTCAGTTCATATTCAACGACTTCATTCGCATTCTTCATGAAGAACAAGCTGATGTTGTGAATGCCAGTTATTCAGTGGTTCAAGATACTGTTTTTCATACCATTCACTGTCAGATAGGAGAATGTGGTGATAGAGCTGGGAGGATATCAGGGAGATTAAAGAGGTTTGTGTATGGTTCTGGTGCTTTTTGA 591 0.4196 MDNIPASSSCGGGDRKVIERNRRSQMRSLCSHLTSLIIPPPSSSSSPSVYEVISLSDQLSEATTYIKKLQIKLEKMKEKKLSLMGINNEPNTTSSRSLANNNNRGIIMGSKSPQVEICHMGSTLEVSVITGLDCQFIFNDFIRILHEEQADVVNASYSVVQDTVFHTIHCQIGECGDRAGRISGRLKRFVYGSGAF 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g0998 196 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 16 86 IPR036638 GO:0046983
Mibi06g0998 196 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 10 69 IPR011598 GO:0046983
Mibi06g0998 196 Pfam Helix-loop-helix DNA-binding domain 16 70 IPR011598 GO:0046983
Mibi06g0998 196 Coils Coil 59 79 - -
Mibi06g0998 196 Gene3D - 14 97 IPR036638 GO:0046983
Mibi06g0998 196 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 14 191 IPR015660 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g0998 Mibi-ChrMibi06 29686825 29688044 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi06g0998 5 190 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G20970 39.062 2.12e-35 121
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mibi06g0998 HLH 6.7e-05 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi06g0998 06 29686825 29688044 Mibi06g0998 06 29686825 29688044 CCT