Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g0997 ATGAAGGAATCACAGAAAGAGAATAAAGATATTATTAAAATGGAAGAAGATTCCAATTCATGGCTACGAAGGACCAAATTCTCTCACACTGTGTGTCACCGATTAGACTCTTCAAGATTATCTTCAATTCCTTTCCGCATTGAGTCTGAAACCTTCTCAGGTCTCAAATCAAGGCCTCCTACGGTTTCTTCCAATCGGAACCAAATCACCGATGTACCAAAGATGCACAAGAATCCTAATGTGAAGAAGCCAAGATCTGTGTCCCCTGCACCAGAAACCTCAATTTCTGACACCTTCCGTGAAGCAAAGCATGAAAGGAAGAGGTTTTCAACTCCAGAGCCTCGTAGGAAAGAAAATCACCATGAAAAGAGGATCATGGGGAAGGTAACTAATAAGGATTCTCGAGATGTCAAGATGTCCATTATGAAATCGCCGTCCAGAAGTCCGATCTTGTCGAATTCGAAACCGGGTGATAGCCCGAAGAATCGGAGGGAATCGGCTTGGACAAAGTATTTTGAACATGGTGGGGGGAAGGTTACTGCTGTGGAAACTGCAGAGGAATGGACAGTGGATCTTTCTAAGCTGTTTATTGGGCTTAGGTTTGCTCATGGAGCTCATAGCAGATTGTATCGTGGTAATTATAAGGATGAACCTGTTGCTGTGAAACTTATTAGGATACCAGATGATGACGAAAGTGGAACCATGGCTGGTCGATTAGAGAAACAATTCATTAGAGAAGTCACCCTTTTATCTCGTCTCCACCATGTTAATGTTATAAAGTTTATAGCTGCTTCCAGAAGCCCTCCTGTTTATTGTGTCGTTACAGAATTTCTGTCAGAGGGTTCCTTAAGGGCATACTTGCATAGGCTAAATCACAAAACTGTTCCTATTGAGAAACTAATAGCTTTTGCTCTGGAAATTGCCCGTGGAATGGAATACATACACTCTCAAGGTATCATACACCGGGACCTTAAACCGGAGAATGTCCTTATCAGCGAAGATTCGCACCTCAAAATTGCTGATTTTGGCATTGCCTGTGAGGAGGCATACCGTGATGTATTTACTGATGACCCTGGCACTTATCGTTGGATGGCCCCTGAGATGATCAAACGTAAATCCTATGGAAGGAAGGTAGATGTGTACAGTTTCGGGCTTATCCTTTGGGAAATGGTGACGGGGACAATACCATATGAGGATATGACTCCCATCCAGGCTGCCTATGCTGTGGTTAATAAGAATACAAGACCTGTTATTCCTTCAAGCTGCCCATCTGCTATTCGAACTTTGATCGAGCAATGTTGGTCCTCACATCCAGATAAGAGGCCGGAGTTCTGGCAGATTGTCAAGATGTTAGAACAACTTGAGTCTTCGTTTTCCCGTGATGGAACTCTGAAACTCCCACAGAACTTTTGCTGCCAAGACCATAAGAAAGGACTCCTTCATTGGATTCAAAAGCTTGGTCCTGTGCATCAAAATAACGGCCCTGTGCCTAAACCGAAGTTCACTTAA 1509 0.4334 MKESQKENKDIIKMEEDSNSWLRRTKFSHTVCHRLDSSRLSSIPFRIESETFSGLKSRPPTVSSNRNQITDVPKMHKNPNVKKPRSVSPAPETSISDTFREAKHERKRFSTPEPRRKENHHEKRIMGKVTNKDSRDVKMSIMKSPSRSPILSNSKPGDSPKNRRESAWTKYFEHGGGKVTAVETAEEWTVDLSKLFIGLRFAHGAHSRLYRGNYKDEPVAVKLIRIPDDDESGTMAGRLEKQFIREVTLLSRLHHVNVIKFIAASRSPPVYCVVTEFLSEGSLRAYLHRLNHKTVPIEKLIAFALEIARGMEYIHSQGIIHRDLKPENVLISEDSHLKIADFGIACEEAYRDVFTDDPGTYRWMAPEMIKRKSYGRKVDVYSFGLILWEMVTGTIPYEDMTPIQAAYAVVNKNTRPVIPSSCPSAIRTLIEQCWSSHPDKRPEFWQIVKMLEQLESSFSRDGTLKLPQNFCCQDHKKGLLHWIQKLGPVHQNNGPVPKPKFT 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g0997 502 MobiDBLite consensus disorder prediction 53 74 - -
Mibi06g0997 502 CDD STKc_MAP3K-like 202 451 - -
Mibi06g0997 502 ProSitePatterns Serine/Threonine protein kinases active-site signature. 319 331 IPR008271 GO:0004672|GO:0006468
Mibi06g0997 502 SUPERFAMILY Protein kinase-like (PK-like) 177 451 IPR011009 -
Mibi06g0997 502 SMART serkin_6 195 454 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi06g0997 502 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 107 456 - -
Mibi06g0997 502 Gene3D Phosphorylase Kinase; domain 1 183 278 - -
Mibi06g0997 502 FunFam serine/threonine-protein kinase HT1 280 473 - -
Mibi06g0997 502 Gene3D Transferase(Phosphotransferase) domain 1 279 478 - -
Mibi06g0997 502 Pfam Protein tyrosine and serine/threonine kinase 201 451 IPR001245 GO:0004672|GO:0006468
Mibi06g0997 502 ProSiteProfiles Protein kinase domain profile. 195 458 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi06g0997 502 MobiDBLite consensus disorder prediction 97 140 - -
Mibi06g0997 502 MobiDBLite consensus disorder prediction 53 164 - -
Mibi06g0997 502 PRINTS Tyrosine kinase catalytic domain signature 313 331 IPR001245 GO:0004672|GO:0006468
Mibi06g0997 502 PRINTS Tyrosine kinase catalytic domain signature 422 444 IPR001245 GO:0004672|GO:0006468
Mibi06g0997 502 PRINTS Tyrosine kinase catalytic domain signature 275 288 IPR001245 GO:0004672|GO:0006468
Mibi06g0997 502 PRINTS Tyrosine kinase catalytic domain signature 378 400 IPR001245 GO:0004672|GO:0006468
Mibi06g0997 502 PRINTS Tyrosine kinase catalytic domain signature 359 369 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g0997 Mibi-ChrMibi06 29672805 29675289 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi06g0997 14 502 MAP Kinase Kinase Kinase AT5G58950 55.492 0.0 591
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Mibi06g0997 PK_Tyr_Ser-Thr 4e-62 CL0016