Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g0993 ATGGCGAGTTGGTTCGGGTCAGCTCAGACATCAATGATCGTCGCCAACACGCCATCGCAGGACCTCGCTCTCACCAATCTCGCCTTCTGCTCCCCCTCTGATATTCAGAAATTCGCTGTTCCCGGTCTCAAAAACATCTTCCTCGCTCTCGTTGGGGACACCTTCCGTCGGTGTGCCAAAGTTTCTTCCGCTGAGCCGATAAATGTGAGCAGATTCGTTCCACCTGAGAATTTCAACCTAGCGATGTTAACCCTTGAGTTGGACTTCCTCAAAAAGGGAAGTAAAAGCGAACAGATTGATGCAGTTCAGCTGGGTAAGCAGCTCAAAAAGAGATTTGCAAATCAGGTCATGACTGCAGGACAGAAAGTGTTGTTTGAGTATCATGGAAATAATTACAGTTTCACAGTCAGTCAAGCTGCTGTTGAGGGTCAAGACAAAAGTTCTCTTGAAAGGGGGATGCTATTGGATGACACATACATTGTATTTGAAACATCACGTGATAGTGGAATCAAGATTGTCAATCAGCGTGAGGCTGCCACAAGCAACATTTTTAAGCAGAAAGAGTTCAATCTTCAGTCACTGGGTATTGGTGGTTTGAGTGCAGAATTTGCGGATATATTTCGAAGAGCTTTTGCATCTCGTGTTTTCCCTCCCCATGTGACTTCTAAACTAGGGATCAAGCATGTGAAGGGTATGCTGCTTTATGGACCTCCTGGCACTGGCAAAACTCTCATGGCACGCCAAATTGGAAAAATTTTGAATGGGAAGGAACCAAAGATTGTGAATGGTCCTGAAGTCTTGAGTAAATTTGTTGGTGAAACTGAGAAGAATGTTAGGGATCTCTTTGCTGATGCTGAAAGGGATCAAAAGACTCTAGGGGATGAAAGTGAATTGCATGTCATAATTTTTGATGAAATTGATGCCATTTGCAAGTCAAGAGGTTCAACTCGAGATGGCACGGGAGTTCATGATAGTATTGTGAATCAACTTCTCACTAAGATAGATGGTGTGGAGTCCCTGAATAATGTTTTGCTTATTGGGATGACCAACAGAAAGGACATGCTGGATGAAGCCCTTTTGAGACCTGGGCGATTAGAAGTCCAAGTTGAGATAAGCCTTCCTGATGAAAATGGCCGATTGCAAATTCTTCAAATTCATACTAACAAAATGAAGGACAATTCTTTCTTATCTCCTGATGTGAATCTTCAAGAGCTTGCTGCTCGAACCAAAAACTACAGTGGTGCAGAACTTGAAGGTGTTGTAAAGAGTGCAGTATCATTTGCTTTAAATCGACAACTTAGTCTAGATGATCTCACCAAGCCTGTGGAGGAAGAGAATATCAAGGTTACAATGGACGATTTTTTGAATGCACTTCATGAAGTTGTTCCTGCATTTGGAGCTTCAACTGATGACCTTGAAAGATGCAGGCTTGGTGGTATGGTGGATTGTGGTGATAGACATAAGCACATTTACGAAAGAGCTATGCTACTTGTGGAGCAAGTTAAAGTGAGCAAAGGAAGCCCACTTGTTACTTGTCTTCTCGAAGGCCCTAGTGGCAGTGGTAAAACTGCACTTTCAGCTACTGTTGGCATCGACAGCGATTTCCCATATGTCAAGATTGTTTCAGCTGAATCAATGATTGGTCTCCATGAAAGCACCAAATGTGCACAGATTATCAAGGTTTTTGAGGATGCATACAAATCACCATTGAGCGTCATTATTCTTGATGACATTGAAAGATTATTGGAGTATGTTGCCATTGGTCCACGATTTTCAAATTTGATTTCTCAGACACTACTGGTCCTGCTAAAACGGCTTCCTCCAAAGGGGAAAAAGCTCCTAGTTATTGGTACAACAAGTCAACTGATTTTCTTGGACTCAGTTGGATTTTGTGACACTTTCTCTGTCACTTACCACGTTCCTACATTGAACACAAATGATGTGAAGAAGGTTCTGAAACAGTTGAATGTCTTTGATGAGGGTGATGTTGATGATGCTGCGGAGGCCTTGAATGATATGCCTATCAAGAAGCTATTCACGTTGGTTGAGATGGCAGCCCAAGGTGAACATGGAGGATCTGCAGAAGCAATCTATTCTGGCCGAGAGAAAATTCAGCTATCTCACTTTTATGATTGCCTTCAGGACATCGTCCGAGTTTGA 2160 0.4273 MASWFGSAQTSMIVANTPSQDLALTNLAFCSPSDIQKFAVPGLKNIFLALVGDTFRRCAKVSSAEPINVSRFVPPENFNLAMLTLELDFLKKGSKSEQIDAVQLGKQLKKRFANQVMTAGQKVLFEYHGNNYSFTVSQAAVEGQDKSSLERGMLLDDTYIVFETSRDSGIKIVNQREAATSNIFKQKEFNLQSLGIGGLSAEFADIFRRAFASRVFPPHVTSKLGIKHVKGMLLYGPPGTGKTLMARQIGKILNGKEPKIVNGPEVLSKFVGETEKNVRDLFADAERDQKTLGDESELHVIIFDEIDAICKSRGSTRDGTGVHDSIVNQLLTKIDGVESLNNVLLIGMTNRKDMLDEALLRPGRLEVQVEISLPDENGRLQILQIHTNKMKDNSFLSPDVNLQELAARTKNYSGAELEGVVKSAVSFALNRQLSLDDLTKPVEEENIKVTMDDFLNALHEVVPAFGASTDDLERCRLGGMVDCGDRHKHIYERAMLLVEQVKVSKGSPLVTCLLEGPSGSGKTALSATVGIDSDFPYVKIVSAESMIGLHESTKCAQIIKVFEDAYKSPLSVIILDDIERLLEYVAIGPRFSNLISQTLLVLLKRLPPKGKKLLVIGTTSQLIFLDSVGFCDTFSVTYHVPTLNTNDVKKVLKQLNVFDEGDVDDAAEALNDMPIKKLFTLVEMAAQGEHGGSAEAIYSGREKIQLSHFYDCLQDIVRV 719
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g0993 719 CDD AAA 502 620 - -
Mibi06g0993 719 Gene3D - 374 461 - -
Mibi06g0993 719 Gene3D - 75 172 - -
Mibi06g0993 719 FunFam Vesicle-fusing ATPase 76 172 - -
Mibi06g0993 719 Gene3D - 471 641 IPR027417 -
Mibi06g0993 719 FunFam Vesicle-fusing ATPase 374 461 - -
Mibi06g0993 719 Gene3D - 7 72 - -
Mibi06g0993 719 PANTHER VESICULAR-FUSION PROTEIN NSF 10 718 IPR039812 GO:0016887|GO:0035494
Mibi06g0993 719 FunFam vesicle-fusing ATPase isoform X1 470 641 - -
Mibi06g0993 719 FunFam Vesicular-fusion ATPase SEC18 184 374 - -
Mibi06g0993 719 Gene3D - 181 373 IPR027417 -
Mibi06g0993 719 Pfam AAA+ lid domain 399 454 IPR041569 -
Mibi06g0993 719 ProSitePatterns AAA-protein family signature. 343 361 IPR003960 GO:0005524|GO:0016887
Mibi06g0993 719 SUPERFAMILY Cdc48 domain 2-like 75 177 IPR029067 -
Mibi06g0993 719 Pfam Cell division protein 48 (CDC48), domain 2 98 143 IPR004201 -
Mibi06g0993 719 SMART AAA_5 228 375 IPR003593 -
Mibi06g0993 719 SMART AAA_5 508 629 IPR003593 -
Mibi06g0993 719 CDD AAA 230 373 - -
Mibi06g0993 719 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 472 683 IPR027417 -
Mibi06g0993 719 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 207 471 IPR027417 -
Mibi06g0993 719 Pfam ATPase family associated with various cellular activities (AAA) 513 621 IPR003959 GO:0005524|GO:0016887
Mibi06g0993 719 Pfam ATPase family associated with various cellular activities (AAA) 232 372 IPR003959 GO:0005524|GO:0016887
Mibi06g0993 719 SUPERFAMILY ADC-like 11 75 IPR009010 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g0993 Mibi-ChrMibi06 29566061 29575138 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi06g0993 196 447 Calmodulin-binding Proteins AT3G56690 33.858 6.29e-30 125