Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g0984 ATGGCCTTTGAGCACTACATTTCCCAGGAATGGAAAGGCATTCCAAGTTCCATGACCACAGAAACTAGAAGTCAAGAAGGTTTCGATTGCAACATTTGCTTTGACTTTGCTCTTGAACCTGTGGTCACCCTCTGTGGCCACCTCTATTGCTGGCCCTGCATCTACAAGTGGCTCCATGTCCAAAGCACTTCTCTTGCATCCGATGAGCGCCCACAATGCCCAGTCTGCAGGGCTGATATATGTCCCACCACCTTGGTCCCTTTATACGGTCGGGGCAAAACCCCGGCTTCTCCTGAGCAAGATACAAAGGCATCGTGTCGAGAGATTCTTATACCGCCAAGACCAAGAGCTTTTGGCACTCGAGCCCTTATATCATCATCATCATCTCAAGGCGGTCATCATCGGCGTCTTCCTTATCATTATCCTCATCAAAGTCATCAACAAGTGCTCAATCTCAGCACCACTCTTACAACACCTCAAGGATTTCACCACCCTGTGGCTGGGATGGTTTACGCCACAGTGTTTGGCATCCCGGAAAATTTATATACATACCCAAATTCTTATCAGCAGATGGGCAGTAACAGCCCGAGACTGAGAAGGCAGGTGATGCAAGCAGATAAGTCATTGAACAGAATTTCAATCTTCCTATTTTGCTGTTTTGTTTTATGTCTCATCGTCTTTTGA 684 0.4693 MAFEHYISQEWKGIPSSMTTETRSQEGFDCNICFDFALEPVVTLCGHLYCWPCIYKWLHVQSTSLASDERPQCPVCRADICPTTLVPLYGRGKTPASPEQDTKASCREILIPPRPRAFGTRALISSSSSQGGHHRRLPYHYPHQSHQQVLNLSTTLTTPQGFHHPVAGMVYATVFGIPENLYTYPNSYQQMGSNSPRLRRQVMQADKSLNRISIFLFCCFVLCLIVF 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g0984 227 SMART ring_2 30 76 IPR001841 -
Mibi06g0984 227 Pfam Zinc finger, C3HC4 type (RING finger) 30 76 IPR018957 GO:0046872
Mibi06g0984 227 ProSitePatterns Zinc finger RING-type signature. 45 54 IPR017907 -
Mibi06g0984 227 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF5-RELATED 10 224 IPR045103 GO:0005783|GO:0006511|GO:0061630
Mibi06g0984 227 CDD RING-HC_AtRMA_like 28 78 - -
Mibi06g0984 227 SUPERFAMILY RING/U-box 7 83 - -
Mibi06g0984 227 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 8 115 IPR013083 -
Mibi06g0984 227 ProSiteProfiles Zinc finger RING-type profile. 30 77 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g0984 Mibi-ChrMibi06 29493665 29494348 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi06g0984 6 213 C3H Transcription Factor Family AT4G27470 39.286 2.82e-39 134
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi06g0984 06 29493665 29494348 Mibi06g0984 06 29493665 29494348 ECH